Hyphomicrobium denitrificans 1NES1: HYPDE_29383
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Entry
HYPDE_29383 CDS
T02646
Symbol
secD
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt02024
Quorum sensing
hdt03060
Protein export
hdt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HYPDE_29383 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HYPDE_29383 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYPDE_29383 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hdt02044
]
HYPDE_29383 (secD)
Secretion system [BR:
hdt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HYPDE_29383 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
ACR_tran
SecD-TM1
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
AGK57552
UniProt:
N0B5R6
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All DBs
Position
1343414..1345036
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AA seq
540 aa
AA seq
DB search
MLHFTRWKIIAALLTCLAGFLVALPNFFPKETVQSWPSFMPKKQLTLGLDLQGGAHLLLA
MDQDEIKKDWINNLRDEARKELRDAKIGFTGIGTQGLTQLVIKLAKPEEQAAAIKALHKV
RQPIGNALLGTGAYDVDVLEGPDPGTVILKESEQGLRQRIANAASASIETINRRVNNLGT
SESTIVRQGTDRILIQFPGLKDTKELKKLIGETAKLTFHEVHPSISAEEARMTKIPTGYK
IYPSDKGEGGGEFLLREQPVVQGSDLADAQPGFDSRNGEPVINFRFNQIGARKFGNFTKD
HVGRPFAIVLDDKVLSAPVIREPILGGSGQISGNFTVEGTNTLAVQLRSGSLPTKLTIVE
ERTVGPSLGADSIAAGKLAGIIGGVAVVLLTILAYGTFGIFACVGLVVHLMLTLALMTLI
GSTLTLPGIAGLVLGVAMAVDANVLIYERIREELRVGKMPVAAIDAGFQRAFVTIADSQL
TTLACALIMFWLGSGPIRGFAVTLTIGIMTSIFASVTVVRLLISFWLKAQPKGRIAVVPV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacttcacccgctggaaaatcatcgccgcactgctgacctgcctcgccggcttc
ctggtggcgctgccgaacttcttcccgaaggaaacggtgcagtcgtggccgtctttcatg
ccgaaaaagcaattgacgctcggcctcgacttgcagggcggcgcgcatctgctgctcgcc
atggaccaggacgaaatcaagaaggactggatcaacaaccttcgggatgaagcgcgcaag
gagctccgggatgccaagatcggtttcaccggcatcggtacgcaaggcctgacgcaactc
gtcatcaagctcgcgaagcctgaagaacaggctgccgccatcaaggcgcttcataaagtc
aggcagccgatcggcaacgcgttgctcggcacgggcgcttacgacgttgacgtcttggaa
ggaccggatcccggaacggtcatcctcaaggaaagcgagcaggggctccggcagcgcatc
gcaaacgcggcttccgcgtcgattgaaaccatcaaccggcgcgtcaacaatctcggaacg
tcggaatcgaccatcgtccgccagggcaccgaccgcatcctcatccagtttcctggattg
aaggacaccaaggaactcaagaagctcatcggtgagacggcgaagctgacgttccacgag
gtacatccgtccatttcggcggaagaagccagaatgaccaagatcccgacgggctataag
atctatcccagcgacaagggagaaggcggcggcgagttcctactgcgcgagcagcccgtt
gtgcagggatcggatcttgccgacgcgcagccgggattcgacagccgcaacggcgagccg
gttatcaacttccggttcaatcagatcggcgcccgcaagttcggcaacttcacgaaggac
cacgtcggtcggccgttcgccattgtgctcgacgacaaggtgctttccgcgcccgtcatc
cgcgagccgattctcggcggatcgggacagatctcgggcaacttcacggtcgaggggacg
aatacgcttgccgttcagttgcggtcgggctcgcttccgaccaagctcacgatcgtcgag
gagcggacggtcggaccgtcgctcggcgccgactcgatcgctgccggcaagctcgccggc
atcatcggcggtgtcgccgtcgttttgttgactatccttgcctacggaacattcggcatc
ttcgcgtgcgtcggcctcgtcgtgcacttgatgctgacgctggcgctgatgacgctcatc
ggctcgacgctgacgctgccgggtattgccggtctcgttctgggcgttgccatggcagtc
gatgccaacgtgttgatctacgaacgcatccgcgaggagctgcgcgtcggcaagatgccc
gttgcggccatcgatgccggattccagcgtgctttcgtgacaatcgcggacagccagctg
accacgcttgcctgcgccctgatcatgttctggctgggctcgggtccgatccgtggcttc
gccgtgacactgacgatcggcatcatgacctcgatcttcgcatcggtgactgtcgtgcgg
ctgctgatttccttctggctgaaggcccaacccaagggccgcatcgccgtcgttcccgtt
tag
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