Hyphomicrobium denitrificans 1NES1: HYPDE_30533
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Entry
HYPDE_30533 CDS
T02646
Name
(GenBank) ATPase AAA
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03030
DNA replication
hdt03430
Mismatch repair
hdt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYPDE_30533
03430 Mismatch repair
HYPDE_30533
03440 Homologous recombination
HYPDE_30533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdt03032
]
HYPDE_30533
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_30533
Enzymes [BR:
hdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYPDE_30533
DNA replication proteins [BR:
hdt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYPDE_30533
DNA repair and recombination proteins [BR:
hdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYPDE_30533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
NACHT
nSTAND3
AAA_19
Mg_chelatase
AAA_22
AAA_14
ATPase
TniB
Motif
Other DBs
NCBI-ProteinID:
AGK57781
UniProt:
N0BB68
LinkDB
All DBs
Position
complement(1595686..1596807)
Genome browser
AA seq
373 aa
AA seq
DB search
MARAPLVAESEALPESDRLDDFPHPRETRSLVGQDAAMAMLTDALASGRMHHAWLLSGPE
GVGKATLAYQFAKIALARPEERDLFGQGLSIEPNSPTDRQIRAMSHPGLLVIHRTYDPKT
KRFSQTIPVDEVRRLKAFLALSAESQGWRVVIVDSADDMNANAANALLKSLEEPPPRTIF
LVVTSAPGRLLATIRSRCRIVSLSPLSEADLKRAAAQALTSVGKPVPEAHHWESLLPLAQ
GSVGRALTLLGGGGLALQARIDAILNGLPKLDAKSVHALGDELQAPALERKFELFFELYQ
STLARLIAAQATGEGPERDVALAGRLIGPERLATFAELWETTARDKADTSALNLDRKSLI
LGSFARLEAASRR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcgccgttggttgcagagtcagaagcgctgcccgagtctgacagactcgac
gattttccgcacccgcgcgagacacgatcgcttgttgggcaagatgctgcgatggcaatg
ctgacggacgcgctcgcaagcggccgcatgcatcacgcctggctgctgtcggggcccgaa
ggagtcggcaaggcgacgctcgcctatcagtttgcgaagattgcgttagcacgtccggaa
gagcgcgatcttttcgggcagggattgagcatcgagccgaattccccgaccgacaggcag
atccgggccatgtcgcatccggggctgctcgtcatccaccgcacctacgatccgaagacc
aaacgcttctcgcaaacgatcccggtggacgaggtgcgccgcctcaaggcgttcttggcc
ttgagcgccgaatctcaaggttggcgcgtcgtgatcgtcgacagtgccgacgacatgaat
gcgaatgccgccaatgcgctcctgaaatccctcgaggaaccgccgccgcgtacgatcttc
ctggtcgtcacatcggcgccggggcggctgctggcaacgatacgatcgagatgccgaatt
gtatctctgtcgccgctttcggaagctgatttgaaacgcgccgcagcccaagccctgacg
agcgtcggcaagcctgtccccgaagctcatcactgggagtcgctgctgccgctggcccaa
ggcagcgtcggtcgcgctctgacgctgcttggaggcggcggactggcgctccaggcccgg
atcgacgccattctgaatggcctgccgaaactcgacgccaaatccgtgcacgctctcggc
gatgaactccaggcgccagcgctggagagaaaattcgagcttttctttgagctttatcag
tcgactcttgcgcgcctcatcgcagcccaggcgacgggggaggggccggagcgggatgtc
gcgctggcagggcggctgattgggcccgagcgccttgccacattcgccgagctatgggaa
acaacggcccgcgacaaggcggatacgtctgccctgaaccttgaccgcaaatcgctcatt
ctcggaagtttcgcgcgtctggaggccgcgagccgccgttga
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