Hyphomicrobium denitrificans 1NES1: HYPDE_31648
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Entry
HYPDE_31648 CDS
T02646
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00071
Fatty acid degradation
hdt00280
Valine, leucine and isoleucine degradation
hdt00310
Lysine degradation
hdt00362
Benzoate degradation
hdt00380
Tryptophan metabolism
hdt00410
beta-Alanine metabolism
hdt00640
Propanoate metabolism
hdt00650
Butanoate metabolism
hdt00907
Pinene, camphor and geraniol degradation
hdt00930
Caprolactam degradation
hdt01100
Metabolic pathways
hdt01110
Biosynthesis of secondary metabolites
hdt01120
Microbial metabolism in diverse environments
hdt01200
Carbon metabolism
hdt01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HYPDE_31648
00650 Butanoate metabolism
HYPDE_31648
09103 Lipid metabolism
00071 Fatty acid degradation
HYPDE_31648
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HYPDE_31648
00310 Lysine degradation
HYPDE_31648
00380 Tryptophan metabolism
HYPDE_31648
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HYPDE_31648
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HYPDE_31648
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HYPDE_31648
00930 Caprolactam degradation
HYPDE_31648
Enzymes [BR:
hdt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HYPDE_31648
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HYPDE_31648
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HYPDE_31648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
AlaDh_PNT_C
2-Hacid_dh_C
Pyr_redox_2
Pyr_redox
UDPG_MGDP_dh_N
zf-C2H2_7th_ZNF462
F420_oxidored
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AGK58004
UniProt:
N0B3E1
LinkDB
All DBs
Position
complement(1801993..1804005)
Genome browser
AA seq
670 aa
AA seq
DB search
MSEATAELEATRLKDWRFSIDGESIAWAIFDREGESANSLGRRPIEELNAIIERVEAETR
AKTVRGLVIMSGKERGFIVGADIREFEAFQSEQDVINALKPVNALLDRIEKLPIPVVAAI
HGVCVGGGLELILACHYRIATRDDSTRIGFPEVKLGIFPGFNGTARSIKQAGPMAAMQAM
LTGGMIRATVAKAQGFIDQLVGSAGELHWAARKAVLQNRRSQSAGLAKMLLTKWPARGFL
AGKMRQETAKKVREDHYPAPFRLIDLFEKEGGDLDAMKKAETKAFAPLMVSETSRNLRRV
FRLTELLKAQAPKGFKWRPSRVHVIGAGTMGADIAGVCVASGMEVTLQDISPEQLEKGIK
AQSKLFARKFKTRATRDAAKARLIADPEGKGIPRADVIIEAIVERLDIKQKLFADLETKI
KSGAVLATNTSSLKLEDISAPMKDPGRLIGLHFFSPVPQMPLVEVVRGAQTRDEEVKKGA
TFVTAIDKFPLITKDVPGFMVNKVLTPYMFAAMKRLEEGEDKEKIDEAVRAFGMPMGPIE
LADNVGLDICAHVAEILGHPSEGSRLARLVASGRLGKKTGEGFYVWKDGKPVKSDAKFST
AELDKLGCELVEPMIAEAQKTLDEGVVESADLVDAGMIFGTGFAPFRGGPLHYKKTHPGA
KATTARAAAE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcgacggcggaattggaagccacccgcctgaaggactggcgcttttcaatc
gacggcgaaagcatcgcctgggcgatcttcgaccgggaaggggaaagcgcgaattccctc
ggccgccgaccgatcgaagagctgaatgccatcatcgagcgcgtcgaagcggaaacacgc
gccaagacagttcgcggcctcgtcatcatgtcgggcaaggagcgcggcttcatcgtcggc
gccgacatccgggagttcgaggcgttccagagcgagcaggatgtcatcaacgcactgaag
ccggtcaacgcccttctggatcgtattgagaaactgcctatcccggtcgtcgcggcgata
cacggcgtctgcgttggtggcggattggagctgatccttgcctgtcattaccggatcgcg
acgcgcgatgactcgacgcgcatcggcttcccggaggtcaagctcggaattttcccgggc
ttcaatggcactgcacgttcgatcaagcaagccgggccgatggcggccatgcaggccatg
ctgaccggtggcatgatccgtgcgaccgtcgcgaaggcgcaagggttcatcgaccagctc
gtcggcagcgcgggcgaactgcattgggcagcgaggaaagcggttctgcagaaccggcgt
tcgcagtctgccggcctggcaaaaatgctgctgaccaaatggccggcgcgcggatttctt
gcgggcaagatgcgccaggaaacagcaaaaaaagtccgcgaagatcactatcctgcacca
ttccggctgatcgatctctttgagaaagagggcggcgatctcgatgcgatgaagaaggcc
gaaacgaaggcgttcgcgccattgatggtttcggaaacgtcgcgcaatttgcggcgcgtg
ttcagacttacggagcttctgaaggcgcaagcaccaaaaggcttcaaatggcggccgagc
cgcgttcacgtcatcggcgcaggcacgatgggagccgacatcgcaggtgtctgcgtcgcc
tccggcatggaagtaacgttgcaggatatttcgccagagcagcttgagaagggcatcaaa
gcccagagcaagctcttcgcgcgcaagttcaagacaagggcgacgcgcgatgccgccaag
gcgcgcctgatcgccgatcccgagggcaagggtattcctcgcgccgacgtcatcatagag
gccattgtcgaacgcctcgatatcaagcagaagctgttcgcggatcttgaaacgaaaatc
aaatccggcgcggtgctggcgacgaacacctcatccttgaagctcgaagatatttccgcg
ccgatgaaagacccgggccggttgatcggattgcacttcttctcgcctgtaccgcagatg
ccgctggtcgaggtcgtgcgaggcgcccaaactcgtgacgaagaagtgaaaaagggcgca
accttcgtcaccgccatcgacaagttcccgctgatcacgaaggacgtgcccggcttcatg
gtcaacaaggttctgacgccttacatgttcgcggcgatgaagcgtctcgaagaaggcgag
gacaaggaaaagatcgacgaagccgtgcgggcgttcggaatgccgatgggcccgatcgag
ctcgccgacaacgttggcctcgacatctgcgcgcacgtcgccgagattcttggtcacccg
agcgagggttcacgtctcgcaaggctcgttgcatccggccgtctcggcaagaagacgggc
gaagggttctacgtctggaaggatgggaagccggtcaagtccgacgccaagttctcgaca
gccgaactcgacaagctcggctgcgagctggtcgagccgatgatcgcagaagcgcagaag
acgcttgacgaaggcgtcgtcgagtcggccgatctcgtcgatgcgggcatgattttcggg
accggcttcgcgccattccgtggcggtccgctgcactacaagaaaactcatcccggagcg
aaggcaacaaccgcccgcgcggcagccgaatag
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