Hyphomicrobium denitrificans 1NES1: HYPDE_32968
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Entry
HYPDE_32968 CDS
T02646
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hdt01002
]
HYPDE_32968
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
HYPDE_32968
Peptidases and inhibitors [BR:
hdt01002
]
Cysteine peptidases
Family C82
HYPDE_32968
Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYPDE_32968
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AGK58266
UniProt:
N0BCK8
LinkDB
All DBs
Position
complement(2051301..2052830)
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AA seq
509 aa
AA seq
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MQGLVKRHALAIWLVPLSSKWPKWHAAYRGRRAGQGIAARTSFIGTAAKSKEGGARGMKV
LLSTARYWDVFLRSAVTIAIVAFFQICPQFVTSSHAQMTLWDQIQGSLSGGGQDSAPVRK
KEPLDDLRPDATPWRSDAMLNAISAAIDRYQKIVDSGGWPLVPPGRMMRVGDDDPRVPIL
RKRLRITGDMPANGSYYDAETFDSELEEGVKRFQRRHGIRVTGRIEQSVYPVLNTTADER
LAQLKLNLQRLQSLMHGIEDRYVLVNIPAFQLEAVDKYEVQLRHRVIVGRPQRQTPEVRA
MIKALNFFPYWRVPDSVATLDLVPRLKQEPGYLAEEGIRVYNGFNGPELDPKTIDWNAPQ
VASYKFKQDPGEKNALGLLRIDMSNEFGVYMHDTPMKNLFDQQSRPFSAGCVRVQNVFDL
GDWIAHNEPGWEQPGHVRETLAGGQPMELKLTHPIPVYFAYITAWAEPSNGRIEFRPDIY
GRDGAALRTAYQRDNDDAPPATAAAALAP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgcagggcttggtaaagcgccacgctttggccatatggctcgtgccactttcctcgaag
tggccgaaatggcacgcggcatatcggggccgccgagccgggcaagggattgctgcccgc
acgtcgttcattggaacagcggctaaatcgaaggaaggcggggcacgcggaatgaaggtt
ttactttcgacagcgcggtattgggatgtgttcctgagaagcgccgttaccatcgctatt
gtcgcatttttccaaatctgtccgcagttcgtaacttcaagtcacgcgcagatgacgctt
tgggatcaaatccagggatcgctctctggcggcggccaggactcggcgccggtgcgcaag
aaagaacctctcgacgatctccggcccgacgcgacgccatggcgaagcgacgccatgctc
aacgccatatcggctgccatcgatcgctatcagaagatcgtcgatagcggcggctggcct
ctcgtcccgccaggacgcatgatgcgcgtcggcgatgacgatccgcgcgtgcccattttg
aggaagcgcctgcgcatcacgggcgacatgcccgccaacggttcctattacgatgccgag
acgttcgattccgaactcgaagagggggtgaagcgcttccagcgccgccacggcatccgc
gtcacgggccggatcgagcaatcggtatatccggtgctgaatacgacggcggacgagcgg
ctggcgcagctgaaacttaacttgcagcgtcttcagtctctgatgcatggcatcgaggat
cgttatgtcctcgtcaacattcccgccttccagctcgaggccgtcgacaagtacgaggtg
cagttgcgccatcgcgtcatcgtcggccgtcctcaacgccagacaccggaagtgcgcgcg
atgatcaaggcgctgaacttcttcccttactggcgcgttcccgacagcgtcgcgacgctc
gatcttgttccacgtctgaagcaggaacctggatatctcgctgaagaaggcattcgcgtt
tacaacggctttaatggtcctgagctcgatcccaaaacgatcgattggaacgccccgcag
gtggcaagctacaagttcaagcaggatccgggcgaaaagaatgcgctcggtcttttgcgc
atcgacatgtcgaacgagttcggcgtctacatgcatgacacgccgatgaagaatctcttc
gatcagcagagccgaccgttcagcgcgggctgcgttcgcgtccagaacgtcttcgacctc
ggggattggatcgctcacaacgagcccggctgggaacagcctggtcacgtgcgcgaaacg
cttgctggcgggcagccgatggagttgaagctgacgcatcccatacccgtgtactttgcc
tacatcacggcgtgggccgaaccgtcgaatggccgtatcgagtttcgccctgatatttac
gggcgggatggtgcagcgttgcggactgcttatcagcgcgacaacgacgatgcgcctccg
gcgacggctgccgccgcgctggcgccttag
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