Hyphomicrobium denitrificans 1NES1: HYPDE_33018
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Entry
HYPDE_33018 CDS
T02646
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00260
Glycine, serine and threonine metabolism
hdt00460
Cyanoamino acid metabolism
hdt00630
Glyoxylate and dicarboxylate metabolism
hdt00670
One carbon pool by folate
hdt00680
Methane metabolism
hdt01100
Metabolic pathways
hdt01110
Biosynthesis of secondary metabolites
hdt01120
Microbial metabolism in diverse environments
hdt01200
Carbon metabolism
hdt01230
Biosynthesis of amino acids
hdt01240
Biosynthesis of cofactors
hdt04981
Folate transport and metabolism
Module
hdt_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HYPDE_33018 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HYPDE_33018 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HYPDE_33018 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HYPDE_33018 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HYPDE_33018 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HYPDE_33018 (glyA)
Enzymes [BR:
hdt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HYPDE_33018 (glyA)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AGK58276
UniProt:
N0BCL8
LinkDB
All DBs
Position
complement(2059669..2060973)
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AA seq
434 aa
AA seq
DB search
MSTAPAAGTSQTSRFFKAHVSETDPEIFSAIQKEFGRQQHEIELIASENIVSQAVLDAAG
SVLTNKYAEGYPGKRYYGGCQFVDIAEEIAIDRAKKLFNCGFANVQPNSGSQANQGVFNA
LAKPGDTILGLSLAAGGHLTHGAPVNQSGKWFKAVHYMVKPDTHLIDMDEVKKLAHEHKP
RIIIAGGSAYPRKIDFAAFRAIADEVGATFLVDMAHFAGLVAAGLIPSPFPHAHVVTTTT
HKTLRGPRGGMILTNDEEIAKKINSAIFPGIQGGPLMHVIAAKAVAFGEALRPEYKVYIK
NVMDNARALGEVMVQNGFALVSGGTDTHLILVDLRPKKITGNKAEKSLGRAHITCNKNGI
PFDPEKPMVTSGIRLGSPAGTTRGFGVAEFQEIGRLISEVLDGLAKNGEEGNGAVEEAVK
AKATALCDRFPIYA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgcaccggccgctggaacttcgcagacgtcgcgtttcttcaaggcgcacgtt
tcggaaacggatcccgaaattttcagcgccatccagaaagagtttggccgccagcagcat
gagatcgagctcatcgcttccgagaacatcgtctcgcaggccgtcctcgacgccgcgggc
tcggtgctgacgaacaagtatgcagaaggctatccgggcaagcgctattacggcggctgc
cagttcgtcgatatcgccgaagagatcgccatcgaccgcgccaagaagctgttcaactgt
ggctttgcgaacgtgcagccgaactccggcagccaggcgaaccagggcgtcttcaatgcg
ctcgccaaacccggcgacacgatcctcggcctgtcgctcgcagccggcggccacttgacc
cacggcgcgccggtcaaccagtcgggcaagtggttcaaggccgtgcactacatggtcaag
cctgacacgcacctcatcgacatggacgaggtgaagaagctggcgcatgagcacaagccg
cgcatcatcatcgccggcggttcggcgtatccgaggaagatcgatttcgccgccttccgc
gccattgcggacgaagtcggcgcgaccttcctcgtcgacatggcgcacttcgccggtctc
gtggcggccggcctcattccgagcccgttcccgcacgcccacgtcgtcacgacgacgacg
cacaagacactgcgcggtccgcgcggcggcatgattctcacgaacgacgaagagatcgcc
aagaagatcaactcggcgatcttccccggcatccaaggcggcccgctgatgcatgtcatc
gccgccaaggccgttgccttcggtgaggcgctgcgccccgagtacaaagtctacatcaag
aacgtaatggacaatgcccgggcattgggtgaggtcatggtgcagaacggctttgcgctc
gtctcgggtggcaccgatacgcacttgatcctggttgatcttcgcccgaagaagatcacc
ggcaataaggccgagaagtccctgggccgggcgcacatcacctgcaacaagaacggcatt
ccgttcgaccccgaaaagccgatggtgacgtccggcatccgcctcggttcgcccgccggt
acgacgcgcggctttggcgtcgccgagttccaggagatcggccgtcttatttccgaagtt
ctcgacggcttggcgaagaacggggaagagggcaacggtgccgtcgaagaagccgtcaag
gcgaaggcaacggccctttgcgatcgctttccgatctacgcctaa
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