Hyphomicrobium denitrificans 1NES1: HYPDE_33273
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Entry
HYPDE_33273 CDS
T02646
Name
(GenBank) von Willebrand factor A
KO
K20276
large repetitive protein
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYPDE_33273
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_2
VWA
F5_F8_type_C
FixG_C
Motif
Other DBs
NCBI-ProteinID:
AGK58327
UniProt:
N0B7T9
LinkDB
All DBs
Position
2116887..2122373
Genome browser
AA seq
1828 aa
AA seq
DB search
MKKVLHPSVVLDWRRLFSSRRSTIRRRSISIVFAALVSSLFSFSALAGDACVEEQEPNES
PETAQAVSGNFCVQGTISDSDQSIFAWTVGADAAKRPWTVDLAGPHGQQTRVQIHRLEEP
ADADNPAVVGPELSSLVTPDGADSVQRSNFFIIPGVWLVGVSTSAGQGGAFHVSFRADDA
SADQAAPASASAEQAVQVAGQFALKGVLVNDSWSSWQLSPIEARKRWLLTATAPIGANVA
LELQSQDGKPILTSTQIAEGRLELADIGLPAGTYRIHLTSNDSKSYPFSLASASQGPRSP
GREEEPNDSVLSARPLMLGQTMTGRIAHAGDVDTYVLPTTAAGQLLSIRLGGQSRAITRL
CIGGADGAVLQCREGVMPSLDDIVITDAHRFFIVSGGPSPDATYDLAAHVIGQQSADAES
EPNDTGDLANTLAGPLMRGRFVNADTDVFRFKATDSKPRTLKLTGDAATSLEVTDMQAQS
SARVERATGTDGKPVTGPLQLSNLTLAPGDYLVVAKGTDGAYTLETTVSADAAPASGAST
EREPNDAVEQAQALQEGERIAGVISPDGDVDQYRVSIVTPEDIIIHLDPDQGCPVVFALN
WDSWSGSKPTATITGKSFAYPARLQPGDYTISVQHESQCSTASRYTIGFDATNLEAFGDI
EPNDAFAGASAMPPNLKVEGTVGQFTDGDWFKLPKVEKDTGVSIVATGEVEAALTDGKPT
SSAQMAQPTVIASGSQGEIVKGTVPAGATAAIRVNGRGAYTLAVTMDDRATVPTAGAPSS
PSSQAKKSDAPPTVAEPAHPSNAAPSALKAELAFATAEIAAYWHRGQRVPGKLKVINGES
TPVEVTFATTGLRPGWRLDLPPTATIAANSSLDLPLALEVASDPYAARPTKITVSLSKGS
GTLANASASMAASISAQPVGDHLAFELPDELLGGFNVAWTALGGTLLSPPEGANDENGLS
NINDGLSSNAGYIFDAALLPQTTTVRFGGNKTWPVRGITINPQTPGVWPPEYMANFELLL
SADGETFERVLTGEVSQEPREQSFVLPKAIEAKAAQLRILSNHDGNLGRVAVSEWKVIVD
PQVGIGAEIDIADSLRGGHVVWSDPLISAETPVVKGVLEEGGPGPVVSVPSGVAPQVTIG
FHEDRAAQITALEWIDSEPANGAATFPGVMIDASTETPLGPWTRVGEWKLGEGKPSTKTF
DKPIWARFLRFTSARKAGEGGETVQFPTKLRILERASNANYRSILGEWGQYSAASFYEKT
LPAPPVAKPESDDNDSREKAEPLAMDQLVSGRVEIGRDEDWFKILQPEGMDRLTIMLGGE
PTIGADISLVDDADKPVVLVDTGGTPREADFEARVVPGKTYYLKVSQPPHSVMIAYDTSG
SLLAFIPIIYNALEVFAAGVHPGQEAVNFMPFDRPAMLPDFSDQPAILKQALAKDSREST
TSGLEGTSITAMRNLSTRRGTRALLLVTDAASSTTEATTDLWKMVEQTRPRIFAAHTGSF
DDPLHEKQTMQDLSLASGGHYASSRSQPELDVAFDRVAAWLRRPAGYTLLAKAGKAAPPE
PGRLAVASAAIPVNSEAPPSEKREGGLEIVLDASGSMLKHMDGRRRIEIARTSLARLVKD
HLKPDDRVALRVFGHDKPGSCETTLVQPLGTLDPDAMTATVNGIVPQNLAKTPIAASLSQ
VESDLKDVTGTKTVILLTDGEETCGGDPRAVISTLAAHDIQVRVNIVGFSVDDPMLKGEF
REWARIGRGRYFDAAKAQDLDSAIAAAADVPFAAYDNNGNVVGQGTVDGPGIAVPAGHYR
VEVASTPPQIFSDVMIKERDVTRLSASK
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtgttgcatccaagtgtcgttttagattggaggcgcttatttagttcgcgc
cgcagcacaatccgacggcgctccatttcgatcgtctttgccgctttggtgtcgagcctc
ttctcattcagcgcgcttgccggtgatgcgtgcgtcgaggaacaggaaccgaacgaaagt
cccgagaccgcgcaggccgtcagcggtaacttctgtgtccagggcacgatctccgattcc
gaccagtcgatttttgcctggacagtcggtgcggacgctgcgaagcgcccctggacggtc
gacctcgccgggcctcacggccagcagaccagagttcagatccatcgcctcgaagaaccg
gccgatgccgacaatcctgcggtcgtgggaccggagctgagcagtctggtgacgccggac
ggtgccgattcagttcaacgttcaaactttttcatcataccgggcgtttggctcgtcggc
gtttcgacgagcgccggtcaagggggcgcgttccatgtctcgttccgtgcagacgacgca
tccgctgatcaagccgccccggccagtgcgtctgcggagcaggcagttcaggtcgccggc
cagttcgcgctcaagggcgtgctcgtcaacgatagctggtcttcgtggcaactctccccg
atcgaggcacgcaagcgctggcttttgaccgcgacggcacccattggtgcgaacgtggcg
ctcgaactgcaaagccaggatggcaagccgatcctgacatcaacgcagattgccgaagga
cgtctcgaattggccgatatcgggctcccggccggaacctaccgcattcacctgacgagc
aacgattccaaatcctatcccttttcgctcgcctccgcgtcgcaaggtccacgcagcccg
ggtcgggaagaggagccgaacgacagcgtgctttccgcccggcccttgatgctcgggcag
accatgaccggccgcatcgcgcatgcaggcgatgtcgacacttatgtcctgccgacgaca
gctgcgggtcagctgctgagcattcggctcggtggacagagccgcgccatcacccgattg
tgcatcggcggcgccgacggcgcagtccttcaatgccgcgagggggtgatgccgagcctc
gacgatatcgtcatcaccgatgcgcatcgcttcttcatcgtctccggcgggccgagcccc
gacgccacgtacgatctcgccgcgcatgtcataggccagcaatcggccgacgcggagagc
gagccaaatgacacgggtgatttggctaacacgctcgccggaccgttgatgcgcggccgc
ttcgtcaacgccgacaccgacgtcttccgtttcaaggcaacggattccaaaccccgcaca
ctgaagttgacgggtgatgcggcgacgtcgctggaagtcaccgacatgcaggctcaatcg
tcggcgcgggtggagcgcgcgaccggcacggacgggaagcccgttacgggtcccttgcag
ctttcaaacttgacgctcgcaccgggtgactatctcgtcgtcgcgaagggcacggacggc
gcctatacgctcgagacaaccgtctctgcggacgcggcacccgcgtctggcgcttcaaca
gaacgcgagccgaacgatgcggtcgagcaggcgcaagccctccaagaaggagagcgcatc
gcgggcgtgatttcgccggatggtgatgtcgatcaatatcgtgtgtcgatcgtgacgccc
gaggacatcattattcacctggacccggatcaggggtgtccggtcgtgttcgccttgaat
tgggatagctggtcggggtcgaagccgacggctacaatcacaggaaagagtttcgcttat
ccagcccgattgcaaccgggcgactacacgatttccgtgcagcacgagtcgcagtgttcg
accgcgagccgttacacgatcgggttcgacgcgacaaacctcgaagcattcggagacatc
gaacccaacgacgcatttgccggagcatctgcgatgccgccaaacctgaaagtcgaaggc
acggtcgggcagtttaccgacggcgactggttcaagctgccgaaggttgagaaggacaca
ggcgtttcaatcgtcgctaccggagaggtcgaggccgcattgacggacggcaagccgacg
tcctccgcacagatggcccagccgacggtcattgcgagcggcagccagggagagatcgtc
aaaggcacagttcccgctggcgcgaccgcggcgatccgtgtgaatggccggggcgcctat
acgcttgccgtcacgatggacgatcgcgcgacggtcccgaccgccggcgcaccgtcatct
ccttcgtcccaggcaaaaaagtccgacgcaccaccaacggtcgccgagcctgcgcaccca
agcaacgctgcaccaagtgcacttaaagcggagttggcattcgcaaccgcagaaatcgcg
gcctactggcatcggggccagagggttccggggaagctcaaggtgatcaacggcgagagc
acgccggtcgaggtgacgttcgcgacgacgggacttcggcccggctggcgcctcgatcta
cccccgacggccaccatcgccgccaatagctcgctcgacctgcccctcgcgctcgaagtg
gcgtccgacccctatgcggcgcgcccaacgaagatcaccgtatcgctgagcaagggttcg
ggcactcttgcaaacgccagcgcaagcatggcagcgtcaatctcggcgcaaccggtcggc
gatcacctcgctttcgaactgccggatgaactcctcggcggtttcaatgtcgcgtggacc
gcgctaggcggaacgctgctgtccccccctgaaggcgccaatgatgaaaatggcctttcg
aacatcaacgatggcctgagttccaatgcagggtacatcttcgatgcggcgttgctgccc
cagaccacgacggttcgtttcggcggcaacaagacgtggcctgtaagagggatcacgatc
aatccgcaaacgcccggcgtatggccgccggaatacatggcaaacttcgagcttcttctt
tctgctgatggcgagacgttcgagcgggtcttgactggcgaagtcagccaagaaccccgc
gagcagtcgttcgtcctgccgaaagccatcgaagcgaaggctgcgcagcttcgcattctc
tccaaccacgatggcaaccttggccgcgttgcggtcagcgaatggaaggtgatcgttgat
ccgcaggtcggtatcggcgcggagatcgatatcgcagactcgcttcggggcgggcacgtc
gtctggtccgatccgctcatctcggcggaaacaccggtcgtaaaaggcgtgctcgaggag
ggcggcccgggtcctgttgtttcggtgccttctggcgtcgcgccgcaggttacgatcggg
tttcacgaagatcgcgccgcacagatcacggcgttggaatggatcgactcggaaccggca
aacggcgctgcgacgtttcccggggtcatgatcgacgcctcgaccgagacgccgctcggt
ccctggacaagggtcggcgaatggaagctcggcgaaggcaagccttcgaccaagacgttc
gataagcccatctgggcgcgcttcttgcgcttcacatctgccaggaaggcaggcgaagga
ggagaaacggtccagttcccgacgaagctgcgcatcctggagcgagcaagcaacgcgaat
taccgatcgattttgggcgagtggggacaatactcggccgcaagcttctacgaaaaaacg
ctgccggcgccgccggtggcgaagcccgagagtgacgataacgactcacgcgaaaaggcc
gagccgctggccatggatcagctcgtctcgggccgggtcgaaatcggccgcgatgaggac
tggttcaagatcctgcaacccgagggcatggaccggctcacgatcatgctcggcggcgag
ccgaccatcggagccgacatttcgctcgtcgatgacgctgacaagccggtcgtgctcgtc
gacacgggcggcacaccgcgcgaggcggatttcgaggcacgggtcgtgccgggcaagaca
tactatctgaaggtctcgcaacccccgcactcggtgatgatcgcctacgacacgtcgggg
agtctgctcgccttcattccaattatctacaacgccctcgaggtgtttgctgcgggagtt
catccgggacaggaagcggtgaacttcatgccgttcgatcgtcctgcgatgctgccggat
ttcagcgaccagcccgctatcctgaagcaggctctcgcgaaagatagccgtgaaagcacg
accagcggcttggagggtacctccatcaccgccatgcggaatctctcgacgcggcgagga
actcgggcactgttgcttgtgaccgacgctgcgagctcgacgaccgaggcgaccaccgat
ctatggaaaatggtcgaacagacgcggcctcgcatcttcgcggcgcacaccggctcgttc
gacgatcccttgcacgaaaagcagacgatgcaagatcttagtctcgcaagcggcgggcat
tatgcgtcgtctcggagccagcctgagcttgacgtcgctttcgaccgcgtcgctgcgtgg
ctacgccgacccgcgggctatacgttgctcgccaaggccgggaaggctgcgccgccggag
cccggccgcctggccgtcgcctctgccgcaattccggtcaatagcgaggccccgccttcc
gaaaagcgggaaggaggcctggaaatcgtcctcgacgcttcggggagtatgttgaagcac
atggacggccgccgccgaatcgagatcgcacggacatctttagcaagactggtgaaggat
catctcaagccggacgaccgcgttgcgctgcgagtcttcgggcacgacaagcccggctcg
tgcgaaaccacactcgtgcaaccgctcggtactctcgatccggacgcgatgacggcaaca
gtgaatggcatcgttcctcaaaacctggcgaagacgccgattgcagcctcgctgagccaa
gtcgagagcgacctcaaggacgtgacgggaaccaagacggtcattctgctgacggacgga
gaagaaacgtgcggtggcgatccgcgcgctgtcatttccacgctcgctgctcacgacatt
caggttcgcgttaacatcgtgggattttccgtcgacgatccaatgcttaagggcgagttc
cgcgaatgggctcgaattggccgtggccgatatttcgatgccgcgaaggcgcaggatctg
gacagcgcaatcgcggccgccgcggatgtgccgttcgcggcttacgacaacaatggcaat
gtcgtcggccagggcaccgtcgatggcccgggaattgccgttcctgccgggcattatcgc
gttgaggtcgcgtcgacgccgcctcagatattctctgatgtgatgatcaaggaaagagac
gtaaccaggctgagcgcctcgaagtag
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