Hyphomicrobium denitrificans 1NES1: HYPDE_34123
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Entry
HYPDE_34123 CDS
T02646
Name
(GenBank) carbamoyl-phosphate synthase L chain ATP-binding protein
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00280
Valine, leucine and isoleucine degradation
hdt00630
Glyoxylate and dicarboxylate metabolism
hdt00640
Propanoate metabolism
hdt01100
Metabolic pathways
hdt01110
Biosynthesis of secondary metabolites
hdt01120
Microbial metabolism in diverse environments
hdt01200
Carbon metabolism
Module
hdt_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HYPDE_34123
00640 Propanoate metabolism
HYPDE_34123
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HYPDE_34123
Enzymes [BR:
hdt01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
HYPDE_34123
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATP-grasp_3
RimK
DUF2118
ATP-grasp_5
GARS_A
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AGK58496
UniProt:
N0BDC9
LinkDB
All DBs
Position
complement(2281383..2283401)
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AA seq
672 aa
AA seq
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MFKKILIANRGEIACRVIKSARKMGIKTVAVYSDADRDALHVDMADEAVHIGPAPAAQSY
LLMDKIIEACKSTGAEAVHPGYGFLSEREAFPLTLQKNRIVFIGPNARAIAAMGDKIESK
KAAAAAKVSTVPGYLGEISDAKHAVKIANEIGYPVMIKASAGGGGKGMRIAYNAKEAEEG
FQLARSEAKSSFGDDRCFIEKFIENPRHIEIQVLGDKHGNVVYLGERECSIQRRNQKVLE
EAPSPLLDEKTRKAMGEQAVALSKAVGYDSAGTVEFVAGQDRSFYFLEMNTRLQVEHPVT
ELVTGIDLVEQMIRVAAGEKLPFKQADIALKGWAVESRVYAEDPFRNFLPSIGRLVKYRP
PAEGKRDGVTVRNDTGVFEGGEISMFYDPMIAKLVTHAPTRAAAIEAQAAALDAFYIDGI
QHNMPFLAAMMQHPRWRSGNLSTGFIKEEFPDGFEPRVPEGADLTTLAAVAGAIDHLGNA
RRRDITHQMAGRSISFAKRRVVKVGDATVQLEAMGTIPGPYYISILNDAGQPAKTLEITS
DWWPGEPVWHGTVEGTDVAVQVRPIANGMLLSYRGMQAPTYVYTTREAELAALMPVKVAA
DMSKYLLCPMPGLVKTINVTEGQDVKAGDALAIVEAMKMENILKAERDGKVKKVSAKPGD
SLAVDAVILEFA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaagatcctgatcgctaaccgcggcgaaatcgcctgtcgcgtcatcaagtcg
gcgcgcaagatgggcatcaagacggtggcggtctattcggacgccgatcgcgacgcactt
cacgtcgatatggccgacgaagccgtccacatcggtccggcgcccgcagctcaatcctac
cttctcatggacaagatcatcgaggcctgcaaatcgacgggcgccgaggcggtccacccc
ggttatggatttttgtcggagcgcgaggcgttcccgctcacccttcagaagaatcggatt
gtcttcatcggtccgaacgccagggcgatcgcggcgatgggcgataagatcgagagcaag
aaggcggctgctgccgccaaggtctcgaccgtccccggctacctcggcgagatcagcgac
gccaagcacgccgtcaagatcgccaatgagatcggctatccggtcatgatcaaggcctcc
gccggcggcggcggcaagggcatgcggatcgcctacaacgccaaggaagccgaggaaggg
ttccagctcgcgcgttccgaggcgaagtcgtcgttcggagacgatcgctgcttcatcgag
aagttcatcgagaatccccgccacatcgaaattcaggtattgggcgataagcacggcaac
gttgtctatctcggcgagcgagaatgctcgatccagcgccgcaatcagaaggttctcgag
gaagccccgtcgccgttgctcgacgaaaagacccgcaaggccatgggcgaacaggccgtc
gcgctgtcgaaggcggtcggctatgacagcgccggcacggtagagttcgtcgcgggtcaa
gatcgctcgttctactttcttgaaatgaacacacgcctgcaggtggaacatccggtcacc
gagctcgtgacgggcattgatcttgtcgagcagatgatccgcgtcgccgccggcgaaaag
cttcccttcaagcaggctgatatcgcgctgaagggctgggccgtcgaaagccgcgtctac
gccgaagatccgtttcgcaacttcctgccgtcaatcggccgcctcgtgaagtatcgcccg
ccggcggagggcaagagggacggcgtgacggtgcgcaacgacaccggcgtcttcgaaggc
ggcgagatctcgatgttctacgatcccatgatcgccaagctcgtgacccatgcgccgacc
cgcgccgccgcgatcgaggcacaggcggcagcgctcgatgctttctatattgacggcatc
cagcacaacatgccgttcctggccgccatgatgcagcacccgcgttggcgttcgggaaac
ctgtcgacgggcttcattaaagaagaattccccgacggcttcgaacctcgcgtacccgag
ggtgccgatctgacgacactcgctgccgtcgcgggtgccatcgatcacctcggcaatgcg
cgccgccgcgacatcacacatcaaatggcaggccgatcgatcagcttcgccaagcgccgg
gtcgttaaggttggggacgcgaccgtccagcttgaggcgatgggaacgatccctgggccc
tattatatctcgatcttgaacgacgccggtcagccggcgaagactctggaaatcacctca
gactggtggccaggcgagccagtctggcacggcaccgtggaaggtaccgacgtggccgtg
caggtccgcccgatcgcgaacggcatgcttctgtcctatcgcgggatgcaggcgccaacc
tacgtttacacgacccgtgaggcggagcttgcagctctgatgccggtcaaggtcgcggcg
gatatgtcgaaatatctgctgtgcccgatgcccggtctcgtgaagacaatcaacgtcacg
gaaggccaggacgtgaaggccggcgatgcgctggcgatcgtcgaagccatgaagatggag
aacattctcaaggccgagcgcgatggcaaggtaaagaaggtcagcgccaaaccgggcgat
agccttgccgtcgatgcggtgattctcgagtttgcctga
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