Hyphomicrobium denitrificans 1NES1: HYPDE_34168
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Entry
HYPDE_34168 CDS
T02646
Name
(GenBank) (p)ppGpp synthetase I SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00230
Purine metabolism
hdt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
HYPDE_34168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdt03009
]
HYPDE_34168
Enzymes [BR:
hdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
HYPDE_34168
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
HYPDE_34168
Ribosome biogenesis [BR:
hdt03009
]
Prokaryotic type
Other maturation factors
HYPDE_34168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_AH_RIS
RelA_SpoT
TGS
ACT_4
HD
ACT
ACT_AHAS_ss
ThiS
ACT_PSP_2
PsV_CP
Motif
Other DBs
NCBI-ProteinID:
AGK58505
UniProt:
N0BEI8
LinkDB
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Position
complement(2290450..2292696)
Genome browser
AA seq
748 aa
AA seq
DB search
MRPEGVRRVMMRQYELVERVLKYDPKADEALLNRAYVYAMKAHGNQKRASGAPYFSHPLE
VAAILTELKLDDATIATALLHDVIEDTDATRAEIDQMFGPEIGSLVDGLTKIKRLDLVSK
KAEQAENFRKLLIAISTDIRVLLVKLADRLHNMRTLEHMKPESRRRNSEETLDIYAPLAG
MMGMQALREELEDHAFRWLHPEAYEAVTERLAEMRQPNRGLVEEIRQAIARKCADAGISA
EATGREKKPYAIWRKMENKQISLEQLSDIYGFRVIVDSIEDCYRILGIVHTTWSTVPGRF
KDYISAPKRNNYQSIHTTVYGPRHQRVELQIRTHEMQHTAEFGIAAHALYKEKQYQANGH
DVDEDADDSPYGRLRAMISSLLEAANPEEFLEHTKLELFHDQVFCFTPKGRLIALPRGAT
PLDFAYAVHTDIGNEAIAAYINGRHVPIDTHLRNGDEVVIETSKNHVRSAAWEAFAITGR
ARAAIRRAAREAERKRFIELGRQLVGSTLAGMEIDYSEEKIKAAAPKMGFKSADELLAAV
GRNDVALPDILAAIVPQVGGSPVEEGYKPSRRFGRARAQDGWFNIEKIKSLKFRTAEIDN
TATISIGGPSQELPVRFEPGGAVPGDRIVGVMAPGEGIRVFQIHSPRLKEYEEAHWIDAT
WDVDPEHPQRFPARISVTAVNAPGSLAEIAKIIGETGGNIDNIKMAKRAADFTVMHIELE
VFDLVHLDHIIAGLRAKSSVAKVERLFE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcccggaaggagtgcggcgggtcatgatgcggcaatacgaactcgtcgagcgggtt
ctcaaatacgatccgaaagccgacgaggcgctgctcaatcgcgcctacgtctatgctatg
aaggcgcacggcaatcagaagcgcgcgtcgggcgcgccctatttctcgcatcctctcgaa
gtcgccgcgatcctgaccgagctgaagctcgacgatgcgacgatcgcgacggcactcctg
cacgacgtcattgaggataccgacgccacccgggcagagatcgaccagatgttcggaccg
gagatcggcagcctcgtcgacggtctgaccaagataaagcgcctcgatctcgtttccaag
aaagcggagcaggctgaaaatttccgcaaactcctgattgcgatttcgaccgacattcgt
gtgctgctcgtgaagcttgcggaccggcttcacaatatgcgcaccctcgagcacatgaag
cccgaaagccgtcggcgcaattccgaggaaacgctcgatatctatgcgccgctggcgggc
atgatgggcatgcaggcgctacgcgaggagcttgaggaccacgcctttcgctggctgcat
ccggaagcctatgaggccgtgacggaaagactggcggaaatgcgtcagcccaatcgcggt
cttgtcgaggaaattcgacaggcgatcgcgcgcaagtgcgccgatgccggcatcagcgca
gaagcgacgggacgcgagaaaaaaccttacgctatttggcgtaagatggagaacaagcag
atcagtctggaacagctctccgacatctacggtttccgcgtcatcgttgattcgatcgag
gattgctatcgcatcctcggcatcgtccatacgacctggagcacggtgcccggccgcttt
aaggactacatttcggcgccgaagcgcaacaactatcagtccatccacacgacggtctat
gggcctcgccatcagcgtgtcgagctgcaaatccggacgcatgagatgcagcataccgcc
gagttcggcattgcggctcatgcgttatataaagagaagcagtatcaggcgaacggccac
gacgtcgacgaagacgccgacgacagcccctacggacgcctcagggcgatgatctcgtcg
ctgctcgaagcggctaatcccgaggaattccttgagcacaccaagctcgagctttttcac
gatcaggttttctgctttaccccgaaggggcgcctcattgcattgccgcgcggggcgacg
ccgctcgattttgcctacgctgtccacaccgatatcggcaacgaagccatcgcggcctac
atcaacggccgccatgtgcccatcgatacgcacttgcgcaacggcgacgaagttgtgatc
gaaacctcgaagaaccacgtgcgctccgctgcctgggaagccttcgcgatcaccggccgg
gcgcgcgccgcgatacggcgcgcggcgcgcgaagctgagaggaaacgtttcatcgaactt
ggccggcaactcgtcggctcgacgctggcgggcatggagatcgattactcggaagaaaaa
ataaaggccgccgctcccaagatggggttcaaatcggccgatgagcttcttgcggcggtc
ggccgcaatgacgtcgcgttgcccgatatactcgctgcgattgtgccccaggtgggcgga
agcccggtcgaagaaggttacaagccgagccgcaggtttggccgcgcgcgagcgcaggac
ggctggttcaacatcgagaaaatcaagagtctgaaattccgcactgccgaaatagacaat
actgcaacgatttcaattggtggtccgagccaggagctgcctgtccgcttcgagccgggc
ggtgccgttcccggcgaccgaatcgtcggtgtcatggcgcccggcgagggcattcgggta
tttcagatccattcgccgcgcctcaaagagtacgaggaagcgcactggattgatgccaca
tgggacgtcgatcccgagcaccctcaacgatttcctgcgcgaatcagcgtaacagccgtc
aacgccccgggctcgctggccgaaatcgccaagattatcggggaaaccggcggcaatatt
gacaatatcaagatggcgaaacgggcggcagacttcaccgttatgcatatcgagctcgag
gtcttcgatttggtgcatttggaccacataatcgccggcctcagggcgaaatcctctgtc
gccaaggttgaacgtcttttcgagtag
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