Hyphomicrobium denitrificans 1NES1: HYPDE_34603
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Entry
HYPDE_34603 CDS
T02646
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HYPDE_34603 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hdt03011
]
HYPDE_34603 (rpsA)
Ribosome [BR:
hdt03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HYPDE_34603 (rpsA)
Bacteria
HYPDE_34603 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AGK58592
UniProt:
N0B8L6
LinkDB
All DBs
Position
complement(2378566..2380287)
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AA seq
573 aa
AA seq
DB search
MSAEVASKELNPSREDFAALLAESLAKDDLFEGSVVKGKIVGIEKDMAIIDVGLKMEGRV
AMKEFGIGGKPGDLKVGDTVEVYLERVENALGEAVLSRDKARREESWTRLERLYEKGEKV
TGVIFNKVKGGFTVDLDGAVAFLPGSQVDIRPVRDIGPLMHQPQPFQILKMDRRRGNIVV
SRRSVLEESRAEQRTEIVARLAEGQIIDGLVKNITDYGAFIDLGGIDGLLHVTDMAWRRV
NHPSEILNVGDTVKVQIIRINPETQRISLGMKQLQSDPWSSIEAKYPVGARVKGAVTNIA
DYGAFVELEPGVEGLIHVSEMSWTKKNTHPGKIVSTSQQVEVQVLEVDPQKRRISLGLKQ
TQENPWDGFLTAHPKGSVVEGPIRNITEFGLFIGLDNGIDGMVHLSDLDWQKPGDEVIKD
YKKGDNVKAVVLDVDGAKERISLGIKQLAGDPADAMAKYKKGDAVTCTVTSVSDAGIEVK
IADSELTSFVKRGDLSRDRSEQRPERFNVGDKVDAAVVSVDKAARRIAVSIKALELAEEK
QAVAQYGSSDSGASLGDIFKAAIKKREGAEDGE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgaagttgcttcaaaagaattgaatccgtcgcgcgaggattttgccgcgctg
ctcgccgaaagccttgccaaggatgacctgttcgagggctccgtcgtaaagggcaagatc
gtcggcatcgagaaagacatggcgatcattgacgtcggcctgaagatggaaggccgggtc
gcgatgaaggaattcggcatcggcggcaagccgggcgatctcaaggtcggtgataccgtc
gaagtgtacctggagcgcgtcgaaaatgcgctcggtgaagcggtgctgtcgcgcgacaag
gctcgccgcgaagagagctggacgcgcctggaacgtctctatgagaagggcgagaaggtg
acgggcgtcatcttcaataaggtgaagggcggtttcaccgtcgatctcgacggtgcggtt
gcgttccttccgggctcgcaagtcgatatccgtcccgtgcgcgatatcggaccgctgatg
catcagccgcagccgttccagatcctcaagatggatcgccgtcgcggcaacatcgtcgtc
tcgcgccgttcggtgctggaagagagccgtgccgagcagcgcacggagattgtggcgcgc
ctcgccgagggtcagatcatcgacggcctcgtcaagaacatcaccgactacggtgcgttc
atcgatctcgggggcatcgacggcctgctgcatgtcaccgacatggcatggcgccgcgtc
aatcatccgtccgagatcctgaacgtcggcgatacggtgaaggtgcagatcatccgcatc
aaccccgaaacgcagcgtatctcgctcggcatgaagcaactgcaatccgatccgtggtcg
tcgatcgaggcgaagtatccggtcggcgcgcgcgtcaagggagccgtgacgaacatcgcg
gactacggagcgttcgtcgaactggagccgggcgtcgaaggcctgatccatgtctcggaa
atgagctggacgaagaagaacacgcaccccggcaagatcgtttcgacgagccagcaggtc
gaggttcaggttctcgaggtcgatccgcagaagcgccgtatctcgctcggcctgaagcag
acgcaggaaaatccgtgggatgggttcctgaccgcgcatccgaagggctcggtcgtcgaa
ggtccgatccgcaacatcaccgagttcggcctgttcatcgggctcgacaacggcatcgac
ggcatggtccatctctccgatctcgactggcagaagccgggcgacgaggtcatcaaggac
tacaagaagggcgacaacgtcaaagctgtcgtgctcgacgtcgacggcgcaaaggagcgc
atttcgcttggcatcaagcagcttgcgggcgatcccgccgacgccatggcgaaatacaag
aagggcgacgccgtgacgtgcacggtgacgtcggtcagcgatgccggcatcgaggtaaag
attgccgacagtgagctgacatcgttcgtcaagcgcggcgatctctcgcgtgatcgttcc
gagcagcgtcccgagcggttcaacgtcggcgacaaggtcgatgcggccgttgtctcggtc
gataaggcagcacgccgtatcgccgtttcgatcaaggctcttgaacttgccgaagagaag
caggcggtggcgcagtacggatcgtcggattcgggcgcctcgctcggcgatatcttcaag
gccgccatcaagaagcgcgagggagccgaagacggcgagtga
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