Hyphomicrobium denitrificans 1NES1: HYPDE_34708
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Entry
HYPDE_34708 CDS
T02646
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYPDE_34708 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdt03019
]
HYPDE_34708 (groEL)
03110 Chaperones and folding catalysts [BR:
hdt03110
]
HYPDE_34708 (groEL)
03029 Mitochondrial biogenesis [BR:
hdt03029
]
HYPDE_34708 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdt04147
]
HYPDE_34708 (groEL)
Enzymes [BR:
hdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HYPDE_34708 (groEL)
Messenger RNA biogenesis [BR:
hdt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HYPDE_34708 (groEL)
Chaperones and folding catalysts [BR:
hdt03110
]
Heat shock proteins
HSP60 / Chaperonin
HYPDE_34708 (groEL)
Mitochondrial biogenesis [BR:
hdt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HYPDE_34708 (groEL)
Exosome [BR:
hdt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HYPDE_34708 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
HYPDE_34708 (groEL)
Exosomal proteins of breast cancer cells
HYPDE_34708 (groEL)
Exosomal proteins of colorectal cancer cells
HYPDE_34708 (groEL)
Exosomal proteins of bladder cancer cells
HYPDE_34708 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
WHD_MCM4
Motif
Other DBs
NCBI-ProteinID:
AGK58613
UniProt:
N0B6I3
LinkDB
All DBs
Position
2397507..2399141
Genome browser
AA seq
544 aa
AA seq
DB search
MPSKDIKFGQDARDRLLRGVDILANAVKVTLGPKGRNVVLDKSYGAPRITKDGVTVAKEI
ELADKFENMGAQMLKAVASKTSDIAGDGTTTATVLAQAIIREGAKSVAAGANPMDLRRGI
DQAVTAVVEELKSKAKKVTSNEEIAQVGTISSNGDKEIGAKIAEAMKRVGNEGVITVEES
KSLETELDVVEGMQFDRGYLSPYFITNTEKMIVELEEPYILIHEKKLGGLQALLPLLEAV
VQTSKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVVTGGSV
VSEDLGIKLENVTLDMLGRAKKVTIDKEDTTIIDGVGKKPDIEARVNQIKAQIEDTTSDY
DKEKLQERLAKLAGGVAVIKVGGGSEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALL
RAIQSLDALKSGNQDQNTGVSIVRKALQAPARQIFTNAGEDGSVIVGKIFDNPSYAFGFN
AQSGAYGDLVSQGVIDPAKVVRCALQDAASVAGLLITTEAMIADLPEKDTDHASSPMGGG
GMGF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgccctctaaagacatcaaattcggtcaagacgcgcgcgatcgcttgctgcgcggcgtc
gacattcttgccaacgcggtgaaggtcacgctcggacccaagggccgtaacgtcgtgctc
gacaagtcctacggcgccccgcgcatcaccaaggatggcgtgacggttgccaaggaaatc
gagctcgcggacaaattcgagaatatgggcgcgcaaatgctcaaagcggtcgcgtcgaag
acgtccgacatcgccggtgacggaacaacgacagcaactgtgcttgcccaggcgatcatc
agagaaggtgccaagtcggttgcggcgggtgccaatccgatggacctacggcgcggcatc
gatcaggcggttactgctgtcgtcgaggagctgaagtcgaaggccaagaaggtcacgtcc
aacgaagagatcgctcaggtaggtacaatttcctcgaacggcgataaagagatcggcgcc
aaaatcgcagaagctatgaaacgcgtcggcaacgaaggcgtgatcacggtcgaagagagc
aagagcctcgaaacggagctcgatgttgtcgaaggtatgcagttcgatcgcggttatctc
tcgccctactttatcaccaacaccgaaaagatgatcgtggagctcgaggaaccttacatc
ctcatccacgaaaagaagctcggcggcctgcaggcccttctgccgctgcttgaagcggtc
gtgcagacaagcaagccgcttctcattatcgccgaggacgtcgaaggcgaggcgctcgcc
acccttgtcgtcaataagctgcgcggcgggctcaaggttgctgccgtcaaggctcccggg
ttcggtgacaggcgcaaagccatgctcgaagatatcgccgtggtcaccggcggcagcgtg
gtttcagaggatctcggcattaagctcgagaatgtgacgctcgatatgcttggccgcgcc
aagaaggtcacgatcgacaaggaagacaccacgatcatcgacggtgtcggcaagaagccg
gatattgaggcccgcgtaaatcagatcaaggcgcagatcgaagatacgacatcggactac
gacaaggagaagctgcaggagcgtctggcgaagctggccggcggcgtcgctgttatcaaa
gtcggcggcggtagcgaggtggaggtcaaggagcgcaaggaccgcgtcgacgacgccctt
cacgcgacccgcgctgctgttgaagaaggtatcgtgcccggcggaggtgtcgctttactc
agagctatccagtcgctcgacgcgctcaagtccggtaaccaggatcaaaacacaggcgta
tcgattgtacgaaaagcgctgcaggctccggcacggcagatcttcaccaacgccggcgag
gacggttcggtgattgtcggtaagatcttcgataacccatcgtatgcattcggcttcaac
gctcagtccggcgcttatggcgatctcgtctcgcagggcgtaatcgaccccgctaaagtc
gtgcgctgcgcactgcaggacgcggcttccgtcgccggtcttctcatcacgaccgaggcc
atgatcgctgatttgccggagaaggacaccgatcatgcctcatcgccgatgggcggcggc
gggatgggtttctag
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