Hyphomicrobium denitrificans 1NES1: HYPDE_35833
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Entry
HYPDE_35833 CDS
T02646
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hdt01002
]
HYPDE_35833
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
HYPDE_35833
Peptidases and inhibitors [BR:
hdt01002
]
Cysteine peptidases
Family C82
HYPDE_35833
Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYPDE_35833
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AGK58838
UniProt:
N0B727
LinkDB
All DBs
Position
complement(2623884..2626127)
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AA seq
747 aa
AA seq
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MNKLSALRALSLGVLAFCSAGSGLSFAAETGSESSASGATTTYFPPSNAPSAPQTTSALP
EPDKSASPATTPTEPAPSTAAVTPPDTAPATETATPPSTATATPSAETPASSPSPTESAT
APASAGSAQPEAQPSTPPAAAAAAPETLVSPVVEAARRKLAEKSLVGKDNLAPDVAAAAD
YYYTHKEPLWINDGSYNEKARSVISDLKKADDWGLESSDFVIPNLASNADADAQGAAEAQ
LTLSALKYARFARGGRLDPIALSNILDMKPPVKDPKVVMRELAEASHPGPFLRGLNPHHE
GFEKLRQELLKARGATVEEEPTDPAEQVKLPRGKLLRLGVRDDQVALLRQRLKVPSESPD
SNDLYDDALVDAVKDYQRANGLNPDGLVGNGVRNALNGGGKSKRIDPSRNVDRLIANMER
WRWLPENLGSFYVMNNIPEFVSEIWKGKERVLSQKMIVGQPAWPTPVLAANMQYVIFHPS
WGMPDGIKAKELAPRLRQASSSGFDFFDQLFGGGGGNSGGARVIEAYKLQVYYNGRPVDP
NSVNWNTADISRYSFTQPPGPDNPLGLVKFRFPNRHDVYMHDTPERGLFGQTNRALSHGC
MRVGEPRRTAEVILQEDKGYSPEKVGELWNSGADVTLSKPVPVYLVYFTARVNEEGRLET
FGDIYGNDNRVMSALRGHPERYTAPEAIDPTEADQPGAISDAGSNAMTDDAPPVTRKGRN
NKKTASKKNPMTPATTLQDALSSIFLN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctttccgctctccgcgctctcagccttggagttttggcgttctgttcagct
ggaagcgggttgtctttcgctgctgaaacaggctccgagtcttcggcgagtggcgcaaca
acgacatattttccgccgtcgaatgcgccatctgctccacagacgacgagcgcgcttcca
gagcccgataaatcggcgtcgcccgcaaccacgccgacagagccggccccctcgaccgca
gcggtgacgccgcccgatacggctccggcgacagaaaccgcaaccccgccatcgacggct
acggcgacgccatcggcggaaacgccggcgtcatccccctccccgaccgagtcggcaact
gcacccgcgtcggcaggttctgctcaacccgaggcccaaccgtcgacgccgccggctgct
gccgcggccgcgccggagacgctcgtcagccccgtcgtcgaagcggcacgcagaaaactc
gcagagaaatcgcttgtgggtaaggacaacctcgctccggacgtcgccgctgccgctgac
tactactacacgcacaaggagccgctgtggattaacgacggcagctataacgaaaaagcc
agatcggtaatctccgatctcaagaaggccgatgactggggcctcgagtcctccgatttc
gtcattccgaatcttgcgagcaacgctgatgccgacgcccaaggtgccgcggaagcgcaa
ttgacgctctcggctctgaagtacgcgcgcttcgcacgcggcggccgcctcgatccgata
gcgctgagtaacatcctcgacatgaagccgccggtgaaagatcccaaggtggtgatgcga
gaactcgcggaagcgtcgcacccagggcccttcctgcgcggcctgaatccgcatcatgag
gggttcgagaagctgcgccaggaactgctgaaggcacgcggcgcgacagtagaggaagaa
ccgacggacccggccgagcaggtgaagctgcctcgcggaaagctgctgcgcctgggtgtc
cgcgatgatcaggttgcgttgctccgccagcgtctcaaggttccttcggagagccccgac
agcaacgatctctacgacgacgccttggtcgatgcggtcaaggattatcagcgcgccaac
gggctcaaccccgacggcctcgtcggcaacggcgtgcgcaatgcgttgaacggcggcggc
aaatcgaaaagaatcgatccgagccgcaacgtcgaccgcttgattgccaacatggagcgc
tggcgctggctgcccgaaaacctcgggtcattctatgtaatgaacaacatcccagagttc
gtcagcgaaatctggaagggcaaggagcgggtcctcagtcaaaagatgatcgtgggtcag
ccagcgtggccgacgcccgtgctcgcagccaacatgcaatacgtcatcttccacccgagc
tggggcatgcccgacggcatcaaagccaaggagcttgcgcctcgcctgagacaagcatcg
agttccggttttgacttcttcgaccagctttttggcggcggtggaggcaacagcggtggc
gcgcgcgtcatcgaggcttacaagctgcaggtctactacaacggccgtccggtcgacccg
aattccgtcaactggaacacagccgacatcagccgctacagcttcacgcagccgcctggc
ccggacaacccgctcggtttggtgaaattccgtttccccaaccggcatgacgtttacatg
cacgatacgccggagcggggcctgttcggacagaccaatcgtgcgttgagccacggctgc
atgcgcgtcggcgaaccgcgccggactgcggaagtcatccttcaggaagacaagggctat
tcgcctgagaaggtcggagagctctggaacagcggtgccgacgtgacattgagtaagccc
gttccggtctacctcgtctacttcactgcgcgcgtgaacgaggagggtcgtcttgagacg
ttcggcgacatctacggcaacgacaaccgcgtgatgtcagccctacgcgggcatccggag
cgatatacggcgccggaagccatagatccgacggaagcggaccagcccggcgccatcagc
gatgccggatcgaacgctatgaccgatgatgcgccgcctgtaacccgcaagggccgcaac
aacaagaagaccgcttctaagaaaaacccaatgacgcctgccactacgcttcaggatgcg
ctttcgagcatcttcctgaactga
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