Hyphomicrobium denitrificans 1NES1: HYPDE_36353
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Entry
HYPDE_36353 CDS
T02646
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_36353
DNA repair and recombination proteins [BR:
hdt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
HYPDE_36353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
AAA_10
ResIII
AAA_30
T2SSE
AAA_16
DEAD
AAA_19
TrwB_AAD_bind
AAA_7
nSTAND3
CbiA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGK58942
UniProt:
N0B9M9
LinkDB
All DBs
Position
complement(2720147..2721802)
Genome browser
AA seq
551 aa
AA seq
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MKIFAPVYPVEGLVRARNCASGVAQLPRAEGSLNSRGSFRAHGVAAVCVAAVSMPSRNAH
SGPSRAGEARGDQMTKTPGASGAENPVADPRDYVQDGLILIGCSHSGRELVPECIELALA
NRHGLVTGATGTGKTVTLQVLAEGFSAAGVPVFAADIKGDLSGIAVKGDPSPKLVARAEE
IGLKRYGNTSFPTAFWDIFGVDGHPVRATVQEMGPLLLSRLMELTEPQEGVLNIAFRWAQ
DEREAGDERMSILDLKDLRSVIDEMGKRAASLRSKYGHVATSTVGVIQRRLLVLEEQATD
KFFGEPALDIMDFLKVDADGHGVVNVLAAEKLMDTPRLYATFLLWLLTELFEKLPEVGDL
EKPKLVFLFDEAHLLFNDAPKAVLEQVERVTRLIRSKGVGVYYVTQSPGDVPDRVSAQLG
NRIQHALRAFTPKEQKAIRAAAQTFRPNPEIDTERAIQELKVGEALVSLLHDKGEPSMVQ
RTLIRPPMSRVGPITAEERKNLIAKDKANLEKYGQSLTRESAYERLQSRNTVGGQIKERL
SKFSNLFGLKR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattcgccccggtatacccggtcgagggcctagtgcgagcccgaaattgcgcc
tccggcgtggcccaattgccgcgcgcagaaggatcgttaaattcaaggggctcgtttcgg
gcgcatggggtggctgcggtttgcgtcgctgcggtctccatgccatcacggaacgctcac
tcgggcccgagtcgggcaggcgaagcgcgaggagatcaaatgaccaaaacgcccggcgcc
tcaggggccgagaatcccgtcgccgatccccgcgattacgtgcaggacggcctgatcctg
atcggctgtagccattcgggccgcgaattggttccggaatgtatcgaactcgccctcgcc
aaccgccacggtcttgtgaccggggcgaccggcaccggcaagacggtgacgctgcaggtg
ctggctgaaggattttcggccgccggcgtcccggtctttgcggccgacatcaagggtgac
ctctcgggcatcgccgtcaaaggcgacccttcgccaaagcttgtcgcgcgtgccgaagag
atcggattgaagcgctacggcaacacatcatttccgacagcattctgggatatcttcggg
gtcgacgggcatcccgtgcgcgcgaccgtgcaggaaatggggccgctgctgctctcgcgc
ctgatggagctgacggaaccgcaggaaggtgttttgaacattgcctttcgctgggcgcaa
gacgagcgcgaagcgggcgacgagaggatgtcgatcctcgacctcaaggacctccgctcc
gtcatcgacgagatgggcaagcgcgccgcaagcctcagaagcaaatacgggcacgtcgcg
acttcgacggtcggggtcattcagcgccgcttgctggtgctcgaagagcaggccaccgac
aagtttttcggcgagcccgcgctcgacatcatggatttcctgaaggtcgatgccgacggc
cacggcgtcgtcaacgtgctcgccgccgagaaactgatggatacgccgcgtctctacgcg
acgttcctgctgtggctcctgacggagctgttcgaaaagctccccgaggtcggcgatctc
gaaaagccgaagctcgttttcctcttcgacgaagcccatcttttgttcaacgacgcgccg
aaagccgtgcttgagcaagtcgagcgcgtcacgcgcctcattcgctcgaagggcgtcggc
gtctattacgtgacgcagagcccgggcgacgtgccggaccgtgtttcggcccagctcggc
aaccgtattcagcatgcgcttcgtgccttcacgccgaaggagcagaaagccattcgcgcc
gctgcgcagacgttccggcccaatcccgagatcgataccgaacgtgcgatccaggagctc
aaggtcggagaggcgctcgtttcgctccttcacgacaagggcgagccgtcgatggtgcag
cgaaccctcattcggccgccgatgtcgcgcgtcggtccgatcacggccgaggagcgcaaa
aacctcatcgccaaggataaagctaacctggagaaatacggccagtccttgacccgcgaa
tcggcttacgaacgcctgcagtctcgcaataccgtcggcggccagatcaaggagcggctg
tctaaattctcgaatctctttgggttgaagcggtaa
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