Hyphomicrobium denitrificans 1NES1: HYPDE_36543
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Entry
HYPDE_36543 CDS
T02646
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HYPDE_36543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_36543
Enzymes [BR:
hdt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HYPDE_36543
DNA repair and recombination proteins [BR:
hdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HYPDE_36543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Thx
Motif
Other DBs
NCBI-ProteinID:
AGK58980
UniProt:
N0BFV8
LinkDB
All DBs
Position
complement(2763821..2765287)
Genome browser
AA seq
488 aa
AA seq
DB search
MNSTPSASDARPGANAPEFTVSELSGAIKRALEDGFGYVRLRGEISGYRGPHASGHCYFA
LKDDRAKIEAVIWKGTYGRLRFKPEEGMEVVAQGKITTFPGSSKYQIVIEQLEPAGAGAL
MALLEERKRKFAAEGLFDEARKKPRPFLPKVVGIVTSPTGAVIRDMLHGFNERFPTCVLL
WPARVQGEGSAAEVAAAIRGFNALEAGGKIPRPDVLIVARGGGSLEDLWSFNEEIVVRAA
AESRIPLISAVGHETDWTLIDLVADARAPTPTKAAEWVVPKYSELIETLEKFQMRKRTAV
RRVLSDIRTHLKASSRGLPKLQDLIALPRQRFDAVDRRLSRALLANTRAHGTRLARISGR
LSPAPIVQKHSRCRERLDALERRAGQALLNRVAVRRRDFDGKRALLKSLGYQSVLSRGFA
LVRDETGVMVRQARSVSAGAALTVQFSDGRIGVVADGKPIPDAGGAEQSGAKAPRQKNRT
RGGQGSLF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgaattcgacaccctccgccagcgatgcccgccccggcgccaatgcgccggaatttacg
gtttccgagctttcgggcgccatcaaacgtgctcttgaagacggattcggctatgtccgg
ttgcgtggcgagatttccggttaccgcggaccgcacgcgtccggccattgctatttcgcg
ctgaaggatgaccgggcgaagatcgaggccgtcatctggaagggcacatacggacggctg
cgcttcaagcccgaggagggcatggaggtcgtcgcccaaggtaagattacgaccttcccg
ggctcgtccaagtaccagatcgtcatcgagcagctcgagcctgcaggcgctggcgcgcta
atggcactgctcgaagagcgaaaacgcaagttcgcagccgagggcctgttcgacgaagcg
cgcaagaagccgcgtccgttcctgcccaaggtcgttggcatcgtgacgtcgccgaccggc
gccgtcatccgcgacatgctgcacggcttcaacgagcgctttccgacgtgcgtgctgttg
tggccggcgcgcgtacaaggcgaaggtagcgccgccgaggtcgccgccgccatacgcggc
ttcaatgcactcgaagcaggcggaaaaattccgcggcccgacgtgctgatcgtggcgcgt
ggcggcggcagtctcgaagacctttggagcttcaacgaggagatcgtcgtgcgtgcggcc
gccgagagccgcatcccgctgatctccgccgtcggccatgagacggactggacactgatc
gatctcgtggcggacgcgcgcgccccaacgccgacgaaagccgccgagtgggtggtgccg
aaatactccgagctgatcgaaacgctcgaaaaatttcagatgcgcaagcggacggccgtt
cgccgcgtcctttctgacatcagaacgcatctcaaggcgtcgtcccgcggcctgccgaag
ctgcaggaccttatcgccctgccgcgccaaaggttcgacgccgtagatcgtcgcctgtcg
cgcgcgttgctcgccaacacccgcgcccacgggacccggctggcgcgcatcagcggccgc
ctgagcccggcgccgattgttcagaagcattccagatgtcgcgaaagacttgacgcgttg
gaacggcgtgccgggcaggcgctgctcaatcgcgtggccgtgcgtcgcagggactttgat
ggtaaaagagcgttgctcaaatccttgggctaccagagcgtattgtctcgaggctttgcg
ctggtccgcgatgaaaccggtgtaatggtacggcaggcgcgatccgtttcggctggagcg
gcgctcaccgttcagttttcggatggccggatcggggttgttgcggacggcaagccgata
cctgacgcaggcggggcggagcagtccggcgcaaaggcgccgcgtcaaaagaaccggacc
cgcggaggacagggctctcttttttaa
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