Hyphomicrobium denitrificans 1NES1: HYPDE_36783
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Entry
HYPDE_36783 CDS
T02646
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hdt01002
]
HYPDE_36783
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
HYPDE_36783
Peptidases and inhibitors [BR:
hdt01002
]
Cysteine peptidases
Family C82
HYPDE_36783
Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYPDE_36783
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
DUF3954
Motif
Other DBs
NCBI-ProteinID:
AGK59028
UniProt:
N0B7Q5
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Position
2814411..2816441
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AA seq
676 aa
AA seq
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MKCADSGEWKVNFVMRVSCLVAVGLLLSCGPISNVYAAASDESSESSPASSGIETAMRPQ
AAPAETAPDSPAAEPAQSSSSDASVSGNSAATPHVAAVDHLIYLPVGAYLDANKRKLFSK
VDNGDREALQQFYGSRMGATLWVDKNGYTQDAQNLIAALKDADNWGLRSQDYKIPDLKPS
ANGEYGLNDLTDAETQLSLDALTYARDARGGRIINPPEQLSGYLDRKPQLVEPHTVIEAL
ASAPDKGAYLKSLQPQNKQFELLRQKLLALRSGANGETVNIPNGPNLAPGKSSPQIALIR
KALKVPAPSVQADGRPADETYYDDDLARAVEAYKAKKGIEPVTPTITAAVRRSLNGDDGI
SEWKLLANMEEWRWMPEDLGKFYVAVNIPDFKVRVVKNGEVVFDERIVTGSVNRQTPIFS
DLMRTVVFQPRWNVPDSIKIKELLPGLRAGGDPLRRQGLVMERNGRRINAWNVNWYQTDI
RNFNVYQPPGGGNALGVVKFLFPNSHAVYLHDTPSKGLFNESVRAFSHGCMRVRNPVQLA
ELILAHDKGWDKATVDNLAAKGPEENEISLDHPIPVHITYFTAHVGDDGEVESFGDIYGH
EKRITLALQGKWNQIDKTKEPKITPDDIGFDEDADSRHRGDDDDWFGVSDNDDRRHGRKR
YDGGLNHFFQKVLGGL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcgccgactccggcgagtggaaggtaaatttcgtaatgcgcgtgtcgtgtctt
gtggcggtcggcttgttactgagctgcggtccaatttcaaacgtgtacgcggctgcttcc
gacgaaagttcggaaagttcgcccgcctccagcggcatcgagaccgcgatgcgcccccaa
gctgctcccgccgagacggcgccagacagcccggcagcggaaccagctcaaagctcctca
tctgatgcttcggtcagcggcaattctgcggccacaccccatgtcgcggcggttgatcac
ctcatctacctgccggtcggcgcctatctcgatgcgaacaaaagaaagctcttcagtaaa
gtcgataacggcgaccgcgaggctctacagcagttctatggctcgcgcatgggcgcgacg
ctgtgggtcgacaaaaatggctatactcaagatgcgcaaaacctgatcgcagccctgaag
gatgccgataactggggtctgcgctcccaggactacaagattcccgatctcaaaccgtcg
gccaacggcgaatatggcctcaatgatctaaccgatgccgagacgcagctgtcgctcgac
gccctgacttacgcccgcgatgcgcgcggcgggcgtatcatcaatccgccggagcagctc
tcgggttatctcgaccggaaaccgcaactggtcgagccgcacaccgtcatcgaggcgctg
gcatcggcgccggacaagggcgcttatctcaagtcattgcagccccaaaacaaacagttc
gaattgctgcggcagaaacttctggcactcagatccggcgcgaatggcgaaacggtcaat
attccgaacggtccgaacctggcgccgggcaaaagcagcccgcagatcgcgctgatccgc
aaggcactgaaggtaccggcgccgtccgttcaggccgacggaaggccggccgacgagacc
tattatgacgacgatctggcgcgtgccgtcgaagcctacaaggcgaagaaaggcatcgaa
ccggtcacgccgacgatcacggcggcggtccgccgctcgttgaatggtgacgacggcatc
agcgagtggaaactcctcgccaacatggaagagtggcgctggatgccggaagatctcggc
aagttctatgtcgccgtcaacattccggatttcaaagttcgcgtcgtcaagaacggcgaa
gtggttttcgacgaacgcatcgtgaccggcagcgtcaacaggcagacgccgatcttttcc
gatttgatgcgcacggttgtcttccagccgcgctggaacgtgccggattcgatcaagatc
aaagaattgctacccggtctcagggcgggcggcgatccgcttcgccgccagggtctggtg
atggagcgcaacggccgtcgcatcaatgcgtggaacgtcaactggtatcagaccgatatc
cgcaacttcaacgtctaccagccgccgggcggcggaaacgcgcttggcgtcgtcaaattc
ctgttcccgaactcgcatgcggtctatctgcacgatacgccgagcaagggcttgttcaac
gagagcgtccgggcgttcagccacggctgtatgcgcgtgcgcaatccggtccaacttgca
gaattaattctcgcccatgacaagggttgggacaaagccaccgtcgacaatctcgcggcg
aagggaccggaagagaatgaaatctcgttggatcatccgatcccggttcacatcacctac
tttacggcgcacgtcggcgacgatggcgaggtcgagagcttcggcgacatctacggccac
gagaagcgcatcacactggcgctgcagggcaagtggaaccagatcgacaagaccaaggag
ccgaagatcacaccggacgatatcggcttcgacgaagatgccgacagccgccatcgcggt
gacgacgacgattggttcggggtcagcgacaacgacgatcggcgccacggccgcaaacgc
tacgacggcggcctcaatcacttcttccaaaaggttctcggcggcctctga
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