Hyphomicrobium denitrificans 1NES1: HYPDE_37943
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Entry
HYPDE_37943 CDS
T02646
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYPDE_37943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_37943
Enzymes [BR:
hdt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
HYPDE_37943
DNA repair and recombination proteins [BR:
hdt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYPDE_37943
Prokaryotic type
HYPDE_37943
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_8
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AGK59260
UniProt:
N0BGI7
LinkDB
All DBs
Position
complement(3059216..3060328)
Genome browser
AA seq
370 aa
AA seq
DB search
MGAPQKNQKQLPLRPAGAETVAALLRWYEAERRDLPWRYGPRKKADPYRVWLSEIMLQQT
TVKAVIPYFQKFVTRWPNVAALAAAPLEEVLQQWAGLGYYSRARNLKACADAVVREFGGT
FPRTENELRELPGIGPYTAAAIAAIAFGEKATPVDGNVERVVSRLFAVQQPLPAAKSEIR
NLAATLTPARRAGDFAQAMMDLGAEICTPKNPSCLVCPVQQDCAASARGLAESLPIKAQK
LARPSRYGVAFLVQREDGAVLLRQRPEAGLLGGMLEVPSTHWGDASPSKREALRSAPVTT
SWITVPGTVVHVFTHFRLELVVYRALVPVDASFTLWAEQDRCRWVHRRDLHAQALPSVMK
KVIAHGMNSD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctcctcagaaaaaccagaagcaattgccgcttcggccggctggcgcggagacc
gtcgcggcattactcagatggtacgaggccgagcgccgcgatcttccttggcgctatggc
ccgcgcaagaaagccgatccttatcgcgtctggctgtcggagatcatgctgcagcagacg
acggtgaaagccgtcattccgtatttccagaaattcgtgacgcgctggccgaacgtcgcc
gcgctcgctgcagcaccactcgaagaagtcctgcagcaatgggcgggtctcgggtactat
tcccgcgcgcgaaatctcaaggcttgcgccgacgctgtcgtgcgtgagttcggcggcacc
ttcccgcgcaccgagaacgaattgcgcgaattgccaggcattggtccttatacagcggca
gcaatcgcggcgattgcgtttggagagaaagcgaccccggtcgacggcaatgtcgagcgt
gtcgtgtcgcggctctttgcggtccagcagcctctccccgcagccaaatcagaaatacgc
aatctcgcggcaacgctgactcccgcccggcgggccggagactttgcgcaagccatgatg
gatttgggcgcagaaatctgcacgccgaaaaatccatcctgtcttgtttgccccgtgcag
caggattgtgcggccagcgcacgcggcctcgcggagagcttgcccatcaaggcgcaaaaa
ctggcccgcccgtcccgttacggcgtcgcgttcctcgtacagcgggaagacggtgcggtg
ttgctccggcagcgtcctgaagcaggactgcttggcggcatgctggaagttccatcgacg
cattggggtgacgcgtcaccgtcgaaacgggaagctctgcgatcggcccccgtgacgacc
tcatggattacggtgccgggaacggtggtgcatgttttcacgcacttccggctcgaactc
gtcgtctaccgcgcgctggtaccggtggacgcgagcttcacgctttgggccgagcaggat
cgctgccgctgggttcaccgccgtgatcttcacgcgcaagcactcccgagcgtgatgaaa
aaagtcatcgcgcacgggatgaactcggactga
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