Hyphomicrobium denitrificans 1NES1: HYPDE_38118
Help
Entry
HYPDE_38118 CDS
T02646
Name
(GenBank) TetR family transcriptional regulator
KO
K16138
TetR/AcrR family transcriptional regulator, repressor for uid operon
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hdt03000
]
HYPDE_38118
Transcription factors [BR:
hdt03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HYPDE_38118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_6
TetR_C_31
TetR_C_11
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
AGK59295
UniProt:
N0BGM1
LinkDB
All DBs
Position
3092352..3092993
Genome browser
AA seq
213 aa
AA seq
DB search
MPKLKPDTHRARREHILDAALTCFARGGFHATTMQSICREAGISPGALYVYFDSKEALIA
GLCERDRAEFAERFARLAEAPDFLEALAAIGEHYLVAESPEKQRFVVEMGVEATRNPRIA
EIFMSVDKYCSDSFEALFQRLKDEGRIAPRVDIPTLAKVFNVLGDGMFWRRAIEPKADMR
AVLPVVIEMVGTLLNPTEGLASSHKPSAFEVRR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaactcaagcctgacacgcatcgcgctcggcgtgaacacattctcgacgccgcg
cttacctgtttcgctcgcggcggtttccacgcgacgacgatgcaatccatttgccgggaa
gccggcattagcccgggcgctctctacgtctacttcgacagtaaggaagcgctcattgcc
ggactttgcgaacgcgatcgagcggagttcgcagagcggtttgcgaggcttgccgaagcc
cccgactttctcgaagcgctggcggcaatcggtgaacactacctcgttgcggaatctccg
gagaaacaacgtttcgtcgttgaaatgggggtcgaggcgacgcgcaatccgcgcatcgcc
gagatcttcatgagcgtcgacaaatattgctccgacagcttcgaagcgctctttcagcgt
ctaaaggacgagggccgcatcgcgccgcgcgtcgacattccgacacttgcaaaagtcttc
aacgtgctcggcgacggcatgttctggcggcgtgccatcgagcccaaagcagacatgcgc
gcggttttgccggtcgtgatcgaaatggtcggcacactgctcaatcctaccgagggcctc
gcttcgagccataagccctccgctttcgaggtgcgtcgatga
DBGET
integrated database retrieval system
