Hyphomicrobium denitrificans 1NES1: HYPDE_38543
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Entry
HYPDE_38543 CDS
T02646
Name
(GenBank) Diguanylate cyclase
Organism
hdt
Hyphomicrobium denitrificans 1NES1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_7
PAS_9
PAS
PAS_4
PAS_3
PAS_8
PAS_13
Motif
Other DBs
NCBI-ProteinID:
AGK59378
UniProt:
N0B8L9
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Position
3168791..3170905
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AA seq
704 aa
AA seq
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MAFNLDRLVSSASVSRLGRRKSHSVSFADTSWGKRGFASALDQFGIVSITDPGGRILHVN
DEFIRLSGYSRDELIGRTHAILNSSHHPKTFWAEAYRTLAGGKTWRAQVRNRGKSGRAYW
VDALIVPLNSRNGLKGFLSVQRDITEVVALRAESEERASILQTIVESFPGGITAFDKDHN
VVLCNRRQRELMHYPDELFANGQPTAEDLYRVEANRGEYGPGDAEEHVRKQLDIASRAIP
QTIERRRPNGTYLETRYIPLAHGGFVTTQLDITGRKLDQETIGRLVHHDALTGLPNRSLF
LDRMRSSIAGRGQELLALHCLNLDNLKLVNESLGDLAGDELLKRTAQRLSRLLGDSDTAA
RLGGDDFAVIQAAPKSINDVEAMAKRIISMLSESIGLDGRDITIGTSVGVAVAPTDGTHA
VELIRNADAALRRTKSLARGTYGFFEPSMHERLRQRLRMEMEMREALASNAFELHYQPIV
NTKTLKIVGCEALIRWRHPERGLVPASEFIPIAEECGIIGQIGDWVLKTACAEASRWPDD
VWIAVNISAAQFSGPSLVDKVLAVSKGLPLSQLVLEITETLLMKNRDIAAATLDRLKKLG
VRFAIDDFGTGFSSLSYLQSFPFDKIKIDRSFVSNIANQKRSATLRRSIIQLGYNLGMTS
VAEGVESKQQLDLLRAEGCVEAQGFLFSPAVPSAKIRELFASPL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaatctcgacagattagtatccagcgcttcagtttctcgcctgggccggcgc
aagtctcatagcgtaagctttgccgacacgtcgtggggaaaacggggattcgcgtctgcc
ctcgatcaattcggtattgtttctataacggatccgggtgggcggattctgcacgtcaac
gacgaattcatccggctaagcggatattcgcgggacgaactcataggccgcacgcatgcg
atattgaattcgtcgcatcatccaaagacgttttgggcggaggcttaccgcacgcttgca
ggcgggaagacgtggcgtgcgcaggttaggaacagaggcaaaagcggtcgagcctactgg
gtcgatgctctgatcgtccccctcaacagccgaaatggccttaaaggatttctgtctgtt
cagcgcgacataacggaggttgttgcgctccgagccgagtcggaggagcgcgcatctatt
cttcaaaccatcgtcgaaagcttcccgggcggcatcacggcgttcgacaaggatcacaac
gttgttctttgcaatcgtcggcagagagagctgatgcactatcccgacgagctgtttgcc
aacggtcagccgacggccgaagatctttatcgcgtcgaggcgaatcgcggcgagtacggc
cctggcgatgctgaggagcacgttcgcaagcagctcgatattgcgagccgcgccataccc
caaaccatcgagcgccggcgtcctaacgggacctatctcgaaacccgatacatacctctg
gctcacggcggctttgtcactacacagttagatatcaccggtcgcaagctggatcaggaa
actattggacggcttgttcaccacgacgcgttgacggggctgccgaaccgttcactgttc
ctggatcgcatgcgatccagcatcgccgggcgtggccaagagctcttggcattgcattgc
ctcaatctcgataatctgaaattggtcaatgagagcttgggcgatctcgccggcgatgag
ttgcttaagcgcacggcacaacggctaagccggcttctcggcgacagcgataccgcagcc
cggttaggcggtgatgactttgccgtcattcaagctgctcccaaatccatcaacgacgtc
gaagccatggccaagcgcattatatccatgctgtccgaatcgatcggtttagatggcagg
gatattacaatcggcaccagtgtcggcgtcgcggtagcaccaaccgatggaacccatgca
gtggaactgatacggaacgcggatgccgctctccggcgaacgaagtcgctggctcgcggc
acttacgggttctttgagccttccatgcacgaacgccttcggcaacggcttcgaatggaa
atggagatgcgcgaggcacttgctagcaatgcgttcgagcttcactatcagccaatcgtc
aatacgaagacgcttaagatcgtcggttgcgaagctctgatccgctggcggcatcctgag
cgagggctcgttccggcatcggaattcattccgatcgcggaagaatgcggcattataggg
caaattggtgattgggtcttaaagacggcctgtgcagaagccagccgatggcccgatgac
gtgtggattgcggtcaacatctcggcagctcaattcagcggtccgagcctcgtcgacaag
gttttggcggtttccaaaggattgcctctgtcgcagctggtccttgaaatcacggagacg
ctcctgatgaagaaccgggacattgcagcggcgacgctcgatcgattgaagaagcttggc
gtgcgctttgcgatcgacgattttggaacggggttttcatctctgagctaccttcagagc
ttccccttcgacaaaatcaaaatcgaccgttcgtttgtatccaatatcgcaaatcaaaag
cggtcggcaacgcttcgtcgctccattatccagcttggctataacctcggaatgacgagc
gtcgcggaaggtgtcgaatccaaacagcaattggacttgctacgagcggagggatgcgtc
gaagcacagggcttcttgttctcacctgcagttccatctgcaaaaattcgagagctattt
gcaagtccgctttga
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