Hyphomicrobium denitrificans 1NES1: HYPDE_39483
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Entry
HYPDE_39483 CDS
T02646
Name
(GenBank) succinyl-CoA synthetase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00020
Citrate cycle (TCA cycle)
hdt00640
Propanoate metabolism
hdt00660
C5-Branched dibasic acid metabolism
hdt00720
Other carbon fixation pathways
hdt01100
Metabolic pathways
hdt01110
Biosynthesis of secondary metabolites
hdt01120
Microbial metabolism in diverse environments
hdt01200
Carbon metabolism
Module
hdt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hdt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HYPDE_39483
00640 Propanoate metabolism
HYPDE_39483
00660 C5-Branched dibasic acid metabolism
HYPDE_39483
09102 Energy metabolism
00720 Other carbon fixation pathways
HYPDE_39483
Enzymes [BR:
hdt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HYPDE_39483
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AGK59565
UniProt:
N0BHF5
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Position
complement(3358316..3359515)
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AA seq
399 aa
AA seq
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MNIHEYQAKELYRQYGVPTPNGFAAFSVAEAVEAAKKLPGPVWVVKAQIHAGGRGKGKFL
ESSAGDKGGVRLAKSIDEVKAFAEQMLGKTLITVQTGNAGRIVNRLYIEDGSAIERELYL
SALVDRASSRVAFIVSQAGGMNIEDVAHETPEKIHTLTIDPATGYQPFHGRKVAFALGLK
GDQVKAASNLVQNLYRMVVEKDMSLLEINPLVVTKDGKLICLDGKMNFDSNALYRHPEIV
ALRDLSEEDPTEVEASKHDLAFVKLDGDIGCLVNGAGLAMATMDIIKLYGAEPANFLDVG
GGASKEKVREAFKIILADPAVKGILVNIFGGIMRCDIIAEGVIAAAREMDIKVPLVVRLE
GTNVDLGKKILKESGLKIIPADDLADAAKKITDELKQVA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcacgaataccaggctaaagagctttatcgccagtatggcgtgccgacgccg
aacggctttgccgctttctcagtcgccgaggcggtcgaagcggcgaaaaagctgccaggg
ccggtgtgggtcgtcaaagcgcagattcacgctggtggacgcggcaagggaaagtttctg
gaatcgtccgctggcgacaagggtggcgttcgactcgcgaagtcgatcgacgaggtgaag
gccttcgctgaacaaatgctcggtaaaacgctgatcaccgttcagaccggaaatgcgggg
cgtatcgtcaatcgtctctatatcgaggacggctcggcgatcgagcgcgagctttatctt
tcggcacttgtcgatcgcgcatcttcgcgtgttgcattcattgtcagccaggcaggcggc
atgaacatcgaggatgtcgcccatgagacgcccgagaagattcacaccctgacgatcgat
ccggcaaccggatatcagccgtttcatggccgcaaggtcgcctttgcgttgggcctcaag
ggcgaccaggtgaaggcagcaagcaatctcgtccaaaacctttaccggatggtcgtcgag
aaggatatgagcctgctcgagatcaatccgctagttgtcacgaaggacggaaagctcatt
tgcctcgacggcaagatgaacttcgattcgaacgcgctctaccggcacccggagatcgtc
gcgctgcgcgatctcagtgaggaagacccgacagaggtcgaagcctcgaaacacgatctt
gcattcgtcaagctcgacggcgacatcggctgcctcgtcaacggcgccggcctcgcgatg
gcgacgatggacatcatcaagctttatggtgcagagccagcgaacttcctcgacgtcgga
ggcggtgcttccaaggaaaaagtgcgcgaagccttcaagatcatcctcgccgacccagcc
gtgaagggcatcctggtcaacatcttcggcggcatcatgcgttgtgacattatcgcggaa
ggcgtgattgcggccgctcgcgaaatggacattaaggtgccgctcgtcgtgcgcctcgaa
ggcacgaacgtcgatctcggcaagaaaatcctcaaggagtctggcctgaagatcatcccg
gccgacgatttggccgatgcggccaagaagattaccgatgaattgaagcaggttgcctga
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