Hyphomicrobium denitrificans 1NES1: HYPDE_39603
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Entry
HYPDE_39603 CDS
T02646
Name
(GenBank) aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00020
Citrate cycle (TCA cycle)
hdt00630
Glyoxylate and dicarboxylate metabolism
hdt00640
Propanoate metabolism
hdt00720
Other carbon fixation pathways
hdt01100
Metabolic pathways
hdt01120
Microbial metabolism in diverse environments
hdt01200
Carbon metabolism
hdt01210
2-Oxocarboxylic acid metabolism
hdt01230
Biosynthesis of amino acids
Module
hdt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hdt_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HYPDE_39603
00630 Glyoxylate and dicarboxylate metabolism
HYPDE_39603
00640 Propanoate metabolism
HYPDE_39603
09102 Energy metabolism
00720 Other carbon fixation pathways
HYPDE_39603
Enzymes [BR:
hdt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
HYPDE_39603
4.2.1.99 2-methylisocitrate dehydratase
HYPDE_39603
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AGK59589
UniProt:
N0B7I7
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Position
3378949..3381576
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AA seq
875 aa
AA seq
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MPDAEANGLKGISKLPYSMKVLLENLLRHEDGRTVTKADIAAMAEWLDNKGKKEKEIGFR
PARVLMQDFTGVPAVVDLAAMRDGMTKLGGDPAKINPLVPVDLIIDHSVIVDEFGTPKAL
ADNVALEYARNGERYNFLKWGQGAFHNFRVVPPGTGICHQVNLEYLAQTVWTKQMSDGST
VAYPDTLVGTDSHTTMVNGLAVLGWGVGGIEAEAAMLGQAQSMLIPEVIGFRLTGRLNEG
VTATDLVLTVTQMLRKKGVVGKFVEFYGPGLDSMTLADRATIGNMAPEYGATCGFFPVDK
ETINYLTMSGRDAHRIALVEAYCKAQGLFRESGAADPVFTDTLALDLGAVVPSMAGPKRP
EGRLALGEIKSGFETALVSEYKKPDEAQKRVPVEGKSYDIGHGDVVIAAITSCTNTSNPS
VLIAAGLLARNAVARGLTSKPWVKTSLAPGSQVVAAYLAQSGLQTYLDKIGFNLVGFGCT
TCIGNSGPLAPELSKAINDNGIVAAAVLSGNRNFEGRVSPDVQANYLASPPLVVAHALAG
TVLKDLTKEPIGTGSDGKPVYLKEIWPTTQEIQKFIAENITRDMFKARYADVFKGDNNWQ
SIAISGGLTYGWNGQSTYVQNPPYFQTIGREAKPVGDIVDARILGLFGDKITTDHISPAG
SIKTSSPAGRYLLEHGVQPIDFNQYGTRRGNHEVMMRGTFANIRIKNAMVKDANGNVKEG
GLTIHYPSGKEMAIYDAAMLYEQDGVPLVVFAGIEYGNGSSRDWAAKGTNLLGVRAVVAQ
SFERIHRSNLVGMGVAPFTFQEGTSWQTLGLKGDERVTIRGLAKVKPREVVNLTITRADG
TSIEVPVLCRIDTLDEIEYFKNGGILHYVLRNLAA
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgatgccgaggccaatggcctcaagggtatttccaagctcccttattcgatgaag
gttctgcttgagaacctgttgcgccacgaggacgggcgcacggtgacgaaagccgacatc
gcggcgatggcagaatggctcgataacaagggcaaaaaggaaaaggaaatcggcttccgg
ccggcgcgcgtcctgatgcaggacttcaccggcgttccggcggttgtcgatctcgccgct
atgcgcgacggcatgacgaagctcggcggcgatccggccaagatcaatccgctggtgccg
gtcgatctcatcatcgaccattccgtgatcgtcgatgaattcggaacgccgaaggcgctc
gccgacaacgtggcgctcgaatacgcgcgcaacggcgaacgctacaacttcttgaagtgg
ggccagggcgcgtttcacaatttccgcgtcgtgccgccaggcaccggcatctgccatcag
gtcaatctcgaatacctggcgcagacggtctggacgaagcaaatgtccgacggctcgacg
gttgcctatcccgacacgctcgtcggcacggacagccatacgacgatggtcaacgggctt
gcagtgctcggctggggcgttggcggtatcgaagcggaagcggcgatgctcggtcaggcg
cagtcgatgctcattccggaagtcatcggcttccggctgaccggcaggctcaacgaaggc
gtgacggcgacggacttggttctgaccgtcacgcagatgctgcgcaagaagggcgtcgtc
ggcaaattcgtcgagttctacggccccggccttgacagcatgacgctcgccgaccgcgcg
acgatcggcaacatggcgccggaatacggtgcgacgtgtggcttcttccccgtcgacaag
gagacgatcaactatctcacgatgtcggggcgcgacgcgcaccgcattgcgcttgtcgaa
gcctattgcaaggcgcagggacttttccgcgagtccggtgcggccgatcccgtctttacc
gacacgctggcactcgatctcggcgccgtcgtgccgtcgatggccggaccgaaacggccg
gagggccgccttgcactcggcgaaatcaagagcgggttcgagacggcgcttgtatcggaa
tacaaaaaacccgacgaagctcaaaagcgcgttccggtcgaggggaaatcctacgatatc
gggcatggcgatgtcgtgatcgccgctatcacgagctgcacgaacacgtcgaatccgagt
gttttgattgcggccgggcttctcgctcgcaatgccgtcgcgcggggactgacgagcaag
ccgtgggtgaaaacttctctcgcgcctggatcgcaggtcgtcgccgcgtatctcgcccag
tcgggattgcagacttatctcgacaagatcggattcaatctcgttggcttcggctgcacc
acctgcatcggaaactccggcccgttggcgccggagctgtcgaaagccatcaacgataat
ggcatcgtcgcagcggcggttctctcgggcaaccggaacttcgagggccgtgtcagcccc
gatgtgcaggcgaactatctcgcgtctcctccgctcgtcgtcgctcatgccctagcggga
acagtgctgaaggatctcacgaaagaacccatcggaacgggcagcgacggcaagcccgtc
tatctcaaagagatctggccgacgacgcaggagatccagaaattcattgccgaaaacatc
acacgcgacatgtttaaggcacgctatgccgatgtcttcaagggcgacaacaactggcag
tcgatcgcgatcagcggcggcctgacctacggctggaacgggcaatcgacgtacgttcag
aatccaccctacttccagaccatcgggcgcgaggcgaagccggtcggcgacattgtcgat
gcgcgaatcctcggactattcggcgacaagatcacgactgaccacatctcgcctgccggc
tcgatcaagacgtcgagcccggccgggcgttatttgctcgagcacggtgtgcaaccgatc
gacttcaatcagtacggcacgcggcgcggcaaccacgaagtgatgatgcgcggcacgttc
gccaacatccgcatcaagaatgcgatggtgaaggatgccaacggcaacgtgaaggaaggc
ggcctgacaatccactatccgtccggcaaggagatggcgatctacgacgctgcgatgctt
tacgagcaggacggcgtgccgctcgtcgtgtttgccggaattgaatacggcaacggttca
tcgcgcgactgggcggcgaaaggaaccaaccttctcggcgtgcgcgccgtcgttgcgcag
tcgttcgagcgcattcaccgctcgaacctcgtcggcatgggcgtggcgccgttcaccttc
caggaagggacttcctggcagacgctcggcctcaagggcgacgagcgagtgacgatccga
ggacttgccaaggtcaagccgcgcgaggtcgtcaatctgacgatcacgcgggccgacggt
acgtcaatcgaggtgcctgtgctctgccgtatcgataccctcgacgagatcgaatatttc
aagaacggcggcattctgcactacgtgctgcgcaacctggctgcgtaa
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