Hyphomicrobium denitrificans 1NES1: HYPDE_39758
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Entry
HYPDE_39758 CDS
T02646
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdt03016
]
HYPDE_39758 (trmE)
Transfer RNA biogenesis [BR:
hdt03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HYPDE_39758 (trmE)
Prokaryotic type
Methyltransferases
HYPDE_39758 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
HflX_C
AAA_28
MeaB
ABC_tran
AAA_29
RsgA_GTPase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AGK59620
UniProt:
N0BHJ6
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All DBs
Position
3410728..3412086
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AA seq
452 aa
AA seq
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MDWVAVARVYEYANAMTDAATIFALSSAPGRAALSVIRISGPAVRDVLEKMVAPIPKPRV
AAFRTIRHPETREALDRALLLWFAAPNSETGEDVAEFQGHGSRAAIAAILAALGTMKGCR
LAEPGEFARRGFENGKMDLAEIEGLGDLIEAETEAQRRQALAQSAGMLSKLYEGWRTRLI
EIAALTEAAIDFSDEADVSASSFMEARKRAEALSAEIGAHLDDGHRGEIVRDGFRVALLG
PPNAGKSSLLNALARRDAAIVSAEAGTTRDVIEVRLDLAGLPVVISDTAGIREAGSAVEQ
EGIRRSLATARDADLVVWLSETGDSKLPEGISRETSLAIRSKADLRRESTADLLAISTVT
GEGLDRLVAEIGRRASEAVGTKAEPALTQARHRQSLEVARREIAAFLAGSLESIELRAED
IRRAAHAIGRITGRVDVEDVLDQIFSRFCIGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggattgggttgcagtcgcacgcgtctacgagtacgcgaatgccatgaccgatgctgca
actatcttcgcgctttcgagcgcacccgggcgcgctgccctttccgtcattcgtatctca
ggccccgcggtgcgcgacgtgctggaaaagatggtggcgccgattccaaagccacgtgtc
gcagcattccggactatccggcatcctgaaactcgggaagcgctcgatcgcgcgctactg
ctctggttcgcggcgccgaacagcgaaacgggagaagacgtcgcagagttccaagggcat
ggcagccgggctgccatagcggcgatcctcgcggctctcgggacaatgaaagggtgtcgt
cttgccgaaccgggcgaatttgcgcgccgcgggttcgagaatggcaagatggatctcgcc
gagattgagggtcttggggatcttatcgaggcggagacggaggcccagcgtcggcaggca
ctggcgcaatcggcaggcatgctgtcgaagctctacgagggctggcgaacacggctgatc
gagatcgcggcgttgaccgaggcagcgattgacttttccgatgaggcagatgtttcagct
tcgtccttcatggaggctcgaaagcgggccgaggcgctttccgccgaaattggcgcgcac
ctcgatgacgggcatcggggcgagatcgtccgcgatgggtttcgcgtggcgctgttgggc
ccacccaatgcgggcaaatcgagcctcttaaatgcgctggcgcggcgcgatgctgcaatc
gtttccgccgaagcgggtacgacgcgggacgtcatcgaggttcggctggatctggcaggg
cttcccgtcgtcatctcggataccgcgggcattcgcgaagcggggagtgcagtcgagcag
gagggcattcgccggagccttgcaacagcgcgcgatgccgatctcgtcgtgtggctgagc
gagaccggcgactcaaagcttcccgaaggaatttcacgtgaaacaagccttgcaattcgt
tccaaagccgatcttaggagagaatcaacagcagatttgcttgcgatctcgactgtcacc
ggcgagggattggatcggctagtggcagagattggcagaagggcgagcgaggcggtcggg
acaaaggccgagccggcattgacccaggctcggcaccggcaaagcctggaggtcgcgcgg
agggagattgcagcgttcctggccggcagtctcgaatccatcgagctgagagctgaagat
atccggagggccgcgcacgccatcggccggatcacgggcagggtcgacgtcgaggatgtt
ctcgatcagatcttcagccggttctgcatcgggaagtag
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