Hyphomicrobium denitrificans 1NES1: HYPDE_40623
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Entry
HYPDE_40623 CDS
T02646
Name
(GenBank) methylase/helicase
KO
K26273
protein strawberry notch
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hdt03036
]
HYPDE_40623
Chromosome and associated proteins [BR:
hdt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
HYPDE_40623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
AGK59793
UniProt:
N0B9U2
LinkDB
All DBs
Position
complement(3560738..3565018)
Genome browser
AA seq
1426 aa
AA seq
DB search
MATPSLAPASAAIAQAARLLLPDLERGRRIDAAILRAAMESAFGASDSAGGWDWKTAYDA
CEAATVLFLRKFGPAIRAKAASPAAMLPLLAKIADLLPTHTRRSEESQALQQFSTPVPLG
LAACTAAAITPADWVLEPSAGTGLLAILAELAGGSLVLNELAEARAALLDHLFPDIAVTR
FDAAQIDDHLDVGIAPSVVLMNPPFSAMANVDRRMADAALRHVTSALARLCNGGRLVAIT
GSSFAPDNPAWTGTFAHLQERGRLVFSAAVDGSVYAKHGTTIDTRLLVIDKQPAVDPDMF
PDSSGVAPDAATLLAWVIEQVPPRLPIEASIAVTGARHAIPRTVRAFAMRPSSAPALPEP
EAMELAYETVDWTPPEGARLTEALYEEYGLQSIRISGSQAHPTKLVQSAAMASVAPPKPS
YRPRLPANLVAEGLLSDAQLESVIYAGEAHSNFLAGNWSIDETFDVVTAARDDAENAVRF
RRGWFLGDGTGAGKGRQVAGILLDNWLKGRPRAVWVSKSDKLIEDAQRDWSALGMERLLV
TPLSRFRQGTPIRLAEGVLFATYATLRTDERGEKLSRVQQIVEWLGSDFDGVIIFDESHA
MQNAVGGKGERGDQAASQQGRAGLRLQHALPNARIVYVSATGATTVHNLAYAQRLGLWGG
EDFPFATRAEFVEAIEAGGVAAMEVLARDLKALGLYAARSLSYEGVEYELVEHRLTPEQV
RIYDAYAGAFSIIHNNLDAAMQAANITGETGTLNAQAKSAARSAFESAKQRFFGHLLTSM
KTPSLIRSIERDLEAGHAAVIQIVSTGEALMERRLAEIPTEDWNDVQVDITPREYVLAYL
AHSFPVQLYEPFTDSEGNLSSRPVYRDGQPVESREAVARRDRLIEKLASLPPVPGALDQI
VQRFGTDMVAEVTGRSRRVIRKSDRLMVENRAGSANLAETAAFMDDAKRILVFSEAGGTG
RSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIATDVKAEKRF
LSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYGRDALRQLYMLLVRDKVEGCSLQ
TFEDATGLKLMDANGIKDELPPITTFLNRLLALTIDLQNVLFTAFEQLLTARIEGAIASG
TYDVGLETLRAESFVVTDRCTIYTHPGTGAETRLLTVAQRERNRPVTLNEALDRLSDPRV
VLLVNERSGRAAVQVPAPSLMLDDGEIEQRVRLIRPMESHGVPLKTMAESHWVEAERDTF
ASAWQRELAEVPEFTDSTTHIVGGLLLPIWKRLPNESTRVYRLQTDAGERIIGRKVSPAW
VASTLAEGEPALTPESAFAALMDGRTVLDLAEGLQLRRVRVMGANRIELSGFTDTMRDRL
KAYGLFHEIITWKLRMFVPTDASGVGVLTKVLERFPVERIGEREAA
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
ttggctacgccatcgctcgcgcccgcatctgccgccatcgcccaggccgcgcggctcctt
cttcccgatctcgaacgcggccgccggatagatgccgccatcctgcgcgccgccatggag
tccgccttcggcgcctccgattccgccggcggctgggattggaaaaccgcctatgacgcc
tgcgaggcggctacggtcctgttcctgcggaaattcggaccggccatccgcgccaaggcc
gcgtctccggccgccatgctgcctttgctggcgaagatcgcggaccttctccccacccat
acgcgccgctccgaggagagccaggcgctccagcaattctcgacgccggtcccgctcgga
cttgccgcatgcacggccgcagccatcacgccggccgattgggtgctcgagccttcggcc
ggcaccgggctgctcgccatcctggccgaactggccggcggctcgctcgtgctgaacgag
ctggccgaggcccgcgccgcgttgctcgaccacctctttccggacatcgccgtcacccgg
ttcgatgcggcacagattgacgatcatctcgatgtcgggatcgcgccgagcgtggttctg
atgaacccgcccttctcggcgatggcgaacgtcgatcggcgcatggcggacgctgcgctt
cgccacgtcacctccgccctagcgcggctgtgcaacggcgggcgtctcgtcgcgatcacc
ggatcgagcttcgcgcccgacaatccggcctggaccggcaccttcgctcacctgcaggag
cgcggacggctcgtgttttccgccgccgtcgacggctcggtctatgcgaagcacggcacc
acgatcgacacgcggctgctcgtcatcgacaagcaacccgccgtcgatccggacatgttc
cctgactcttcgggtgtcgcgccggatgcagccaccttgctcgcctgggtcatcgagcag
gttccaccgcgcttgccgattgaagcgtccatcgccgtcaccggtgcgcgtcacgccatc
ccccgcacggtgcgcgccttcgcgatgcgtccgtcctccgctccggcgctccccgaaccg
gaagcgatggagctcgcctacgaaaccgtcgattggaccccgccggagggcgcgcggctc
acggaggcgctttatgaagaatacggattgcagtcgatccgtatttccgggtcgcaggcc
catcccaccaagctggtgcagtcggctgcgatggcctcggtcgcgccgccgaaaccgtcc
tatcggccgcgtctgccggcgaacctcgtcgccgaaggcttgctgtcggacgctcagctc
gaatccgtcatctatgccggtgaggcccattcgaacttcctcgccggcaactggtccatc
gacgagaccttcgatgtcgtcacagcggcgcgcgacgatgccgaaaatgctgtccgcttt
cgacgaggatggtttctcggcgacggcaccggtgcaggtaagggtcgccaggtcgccggc
atcctgctcgacaactggctgaagggccggcctcgcgccgtctgggtctctaaatccgac
aagctgatcgaagacgcccagcgcgattggtcggcgctcggcatggagcggctgctcgtc
acgccgctctcccgctttcgtcagggcacgccgatccggctggcggaaggcgtcctattt
gcgacctacgccacgctgcgcaccgatgaacgcggcgagaagctttcgcgcgtccagcag
atcgtcgaatggttgggctccgacttcgacggagtgatcattttcgacgagagccacgcc
atgcagaacgcggtcggcggcaagggcgaacgcggcgaccaggccgcctcgcagcaaggc
cgggcggggctgcggctccagcacgccttgccgaatgcccgcatcgtctacgtctccgcg
accggcgccacaacggtccataacctcgcctatgcccagcgtctcggactctggggcggc
gaggatttcccgttcgcgacccgcgccgagttcgtcgaggcgatcgaggccggcggcgtc
gcggcaatggaggtgctggcgcgcgaccttaaggcgctcggcctctatgctgctcgctcg
ctctcctacgaaggcgtcgaatacgaactggtcgagcaccggctcacgccggagcaggtc
cgcatctacgacgcctatgccggcgcgttctcgatcattcacaacaacctcgacgcggcg
atgcaggccgcgaacatcacgggcgagactggcacgctgaacgcgcaggcgaagtccgcc
gcgcgctccgccttcgaatccgccaagcagcgcttcttcggccatctgctgaccagtatg
aaaacgccgtcgctgatccgctcgatcgagcgcgatctcgaggccggccatgccgccgtc
atccagatcgtctcgaccggcgaagcgctgatggagcgccggctcgcggaaatcccgaca
gaggactggaacgacgtccaggtcgacatcacaccgcgcgagtacgtcctcgcctatctc
gcccattccttcccggtgcagctctacgagcccttcacggattcagagggcaatctctcc
tcccggccggtctaccgcgacggccagccggtcgagagccgcgaagccgtcgctcgtcgc
gaccgcctgatcgagaagctcgcctcgctcccaccggtgcccggcgcgctcgaccagatc
gttcagcgcttcggcaccgatatggtcgccgaggtcaccggccgctcgcgccgcgtgatc
cgcaagagcgaccgcctgatggtcgagaaccgcgccggctcggccaacctcgcggagacg
gccgccttcatggatgacgctaagcgcatcctcgtcttctcggaagcgggcggcacggga
cgcagctaccacgccgagttgtcggcgcggaatcggcgcctgcgcgtccactacctgctc
gaacccggctggaaggcggatgcggcgatccagggtctcggccgcactaaccgcaccaac
caggcccagccgccgctgttccgtccgatcgccacggacgtgaaagcggagaagcgcttc
ttgagcaccatagcgcgccgcctcgacacgctcggcgcgatcacgcgcggccagcgtcag
accggcggccagggcttgttccggcccgaggacaatctcgaaagccactacgggcgcgac
gcgttgcggcagctctacatgcttctggtcagggacaaggtggagggctgctcgcttcag
accttcgaggacgccaccggcttgaagctgatggacgccaacggcatcaaggacgagctg
ccgccgatcaccaccttcctcaatcgcctgctggcgctgaccatcgatctgcagaacgtg
ctgttcacggccttcgagcagttgctcacggcccgcatcgaaggcgccatcgcgtcaggc
acctacgatgtcgggctcgaaacgcttcgcgccgaaagctttgtcgtcaccgatcggtgc
acgatctacacccatcccggcaccggcgcggagacgcgcctgctcaccgtagcgcagcgc
gagcgcaatcgtcccgtgacgctgaacgaggctctggatcggctctccgatccgcgcgtc
gtgctgctcgtcaacgaacgctcgggacgcgccgccgtgcaagtcccagcgccgagcctg
atgctcgacgatggggagatcgagcagcgcgtgcggctcatccggccgatggagagccac
ggcgtacctttgaagacgatggccgagagccattgggtcgaggcggagcgcgacaccttt
gcctcggcctggcaacgcgagcttgccgaggtgcccgagttcacggacagcacgacccat
atcgtcggcggattgctcctgccgatctggaagcgcctgccgaacgagtcgacgcgcgtc
tatcggcttcagaccgatgcgggtgaacgcatcatcggccgcaaggtctcgcccgcctgg
gtcgcgagcacgctggcggagggcgaaccggcgctgacgccggagagcgccttcgccgcg
ctgatggacggccgcaccgttctcgatctcgccgaaggcctgcagctccgtcgcgtgcgc
gttatgggcgcgaaccgcatcgagctgtcgggcttcaccgacactatgcgcgaccggctc
aaggcctacggcctcttccacgagatcatcacctggaagctccgcatgtttgtgccaacc
gatgcgagcggcgtcggcgtgctgacgaaagtgctggagcgctttcccgtcgagcgcatc
ggcgagcgggaggccgcgtga
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