Hyphomicrobium denitrificans 1NES1: HYPDE_40748
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Entry
HYPDE_40748 CDS
T02646
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hdt01002
]
HYPDE_40748
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
HYPDE_40748
Peptidases and inhibitors [BR:
hdt01002
]
Cysteine peptidases
Family C82
HYPDE_40748
Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYPDE_40748
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
Motif
Other DBs
NCBI-ProteinID:
AGK59818
UniProt:
N0B9W9
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All DBs
Position
complement(3584112..3585863)
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AA seq
583 aa
AA seq
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MVRIFLDKCIQGKDSRKLAASAAGAIGNAGVRVANRDRVMGNFKGILFGTIAAFATIQPV
LADPSPNEAPAQNAPAQPAMPPAPETAAAPAAVAEDPVLGVVRTKLRVTHPADNERERMD
QAALTEFYAARHGEGLWVTASGLKPAAKALAAEIENANAYGLDASVFKLPKLENGALTAT
DTDALADAEIQYSTAALLYARYARGGRIPDPSEMLTTEFDRRPQWIEPATVINALADSHE
PDAYLRSLHPQQPQFEKLRQIYVTMLPKDGKLTKLSPTAKRIRANMEMWRWMWLDMGDFY
VLNNIPEFMQYVYKDGKIIRSAKIVAGQLDKQSTIFSRPLKYVVLRPTWRVPESIMVNEL
WPSLIRGGALMRQYGLQLETKDGRRIDWRKYDWATTDIRDFNVIQPPGPKSVLGHVKFSF
PSQHTIFMHDTPDKWMFRPAQRTLSHGCLRVQNPMQLAEMILMEDKGWDAAKVAELDRSG
PLNNEIPITKEIPIHLVYFTAWVGDDGKLKTFGDVYGHEKRITLALDGQWSKIKKGRNHL
APVEPSFSPAAVAAKSRGIDDEAPRSAQKEESLGDIIGNAFGL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggattttcctggacaaatgcatccaggggaaagattcgcgcaagctcgcggcc
tccgcggcgggcgcaatcggaaacgccggcgtgcgcgttgccaatcgggacagggtgatg
gggaacttcaaaggcattctgttcggcacgatcgcggcctttgcgacgatccagccggtg
ctggcggacccttcgccgaacgaagctccagcacagaacgcgcccgcgcaacccgcaatg
ccccccgcgcccgaaaccgccgccgctccggctgcggtggccgaagatcctgttcttggt
gtcgtgcgcaccaagctcagagtcacacatcctgcggacaacgagcgcgagagaatggat
caggccgcgctcaccgaattctatgccgcgcgtcatggcgaaggactttgggtaactgct
tccggcctgaaacccgctgccaaagcgctcgccgccgaaatcgaaaacgcaaacgcctac
ggtctcgatgccagcgtattcaagctgccgaagcttgagaacggtgcgctgaccgcaacc
gacaccgacgcactcgccgacgccgagatccaatattcgaccgcagccctgctctacgcg
cgctacgcgcgcggcggacgcattccggacccgtccgaaatgctgacgaccgaattcgat
cgccggccacagtggatcgaacccgcgaccgtcatcaacgcgctcgccgactcccacgaa
ccggacgcttatctccggagcttacatccgcagcagccgcaattcgaaaagctccgccag
atctacgtgacgatgctgcccaaggacggcaagctgacaaagctcagccctactgcgaaa
cgcattcgcgccaacatggagatgtggcgttggatgtggctcgatatgggcgacttttac
gtgctgaacaacatccccgagttcatgcaatatgtctacaaggacggcaaaatcatccgc
tccgcgaagatcgttgcaggccagctcgacaagcagtcgacgattttttcgcgccctttg
aaatacgtcgtgctccgtccgacgtggcgcgttccggaaagcatcatggtcaacgagctg
tggccgagcctcatccgcggcggcgccttgatgcgtcagtacgggctgcagcttgaaacc
aaagacggcaggcggatcgattggcgcaagtacgattgggcgacgaccgacattcgcgac
ttcaatgtcatccagccgcccggtccgaaaagcgtactcggtcacgtcaagttttcattc
ccaagccagcacacgatcttcatgcacgacacaccggacaaatggatgttccgtccggcg
caacgcacgctcagccacggctgcctccgcgtacaaaatccgatgcagctcgccgaaatg
atcctgatggaagacaaaggctgggacgccgccaaggtcgccgagctcgatcgctcaggg
cccctcaacaatgagatcccgattacgaaagaaattccgattcacctcgtctatttcacg
gcttgggtcggcgatgacggcaagctgaagacgttcggtgacgtctacgggcatgaaaag
cggatcactctggcactcgacggccaatggtcgaaaatcaagaaagggcgcaatcatctg
gcgcccgtcgagccaagcttcagcccggccgccgtcgctgccaaatcccgcggtattgat
gacgaagccccgcgttccgctcagaaggaagaatcgctcggcgacattatcggcaacgcc
ttcggactttga
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