Hyphomicrobium denitrificans 1NES1: HYPDE_40978
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Entry
HYPDE_40978 CDS
T02646
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K23612
neural Wiskott-Aldrich syndrome protein
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt04517
IgSF CAM signaling
hdt05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
HYPDE_40978
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
HYPDE_40978
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
HYPDE_40978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hdt04131
]
HYPDE_40978
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hdt04812
]
HYPDE_40978
Membrane trafficking [BR:
hdt04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
HYPDE_40978
Cytoskeleton proteins [BR:
hdt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
HYPDE_40978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clp_N
Motif
Other DBs
NCBI-ProteinID:
AGK59864
UniProt:
N0B8B4
LinkDB
All DBs
Position
3623914..3625722
Genome browser
AA seq
602 aa
AA seq
DB search
MGVTAADLAQIPMSPDLGATLSRGAEFAAAAGASDVTLEHLLAALCDDSDAIAVLDASNV
NIASLKSDVVGQFAQPAADPEQAPTSLGVSHDVRRILEAAAAAARGSRRRDINGAIVLAA
IVGDGRSLAADILQAHGLTFDSAIRALQAALAPAPPRAPAAQPPVADDVLARARERVQSR
SAPSLRDLMKDMPQPAPPPPIAAPVATGAASEPVSPETPRTESGSMPPASAPPSLAQPAP
SAPNEKPSPASGVEPRSAAQPDSAENAVSRRGPDVSPGHSPRPPFGPSLEPPDRAVAQPS
VRGTPPGQPYAPAPPVRGLHPGAPSPIQGFSGDLPRPRPTGGLPPPIPLPLGPGAPGMRA
PFPGPTLPAPSPIAPPGPLQNDSGLRADERVDQPPAGAPPAAQPRPQPSREKGAGRKRGR
GAKAESGQLAENIPRAMRVGKTERVEVRIAKASIKSLAENLDGGGAVWQHQITVTKAMAV
RVRAPDGGFFIETASPETQWIESNLGYGSDDFASWRFLITPQSRGWSQLQIVVSARTIGA
DGVAAETALPDQVIEVKVRRNLKRTFARLFSWTVAAIIGGVLSTFSESGLTTAKTLLERL
IH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgtaactgctgctgatcttgctcaaattccgatgtcgccggatctcggtgcaacg
ctgtcgcgtggcgccgagtttgcggccgcggccggtgcgtccgatgtaactcttgagcac
ttgttggccgcgctctgcgacgattcggacgccatcgcagtactcgacgcgagcaacgtt
aatatcgcgtcgctcaaatcggacgtcgtggggcagtttgctcagcctgccgccgatccg
gaacaggcgccgacgagcctcggcgtttcgcatgacgtgcgccgtattctcgaagccgct
gctgctgcggcgcgcggcagcagacggcgagatattaacggcgccatcgttctcgcggcc
attgtcggcgacgggcgcagcttggccgcggacatattgcaggcgcatgggctgacattc
gacagcgcaatccgcgccctgcaggccgcgctcgcgcctgcgccgcctcgggctccggcc
gctcagccgccggttgccgacgatgttctggcgcgagcccgggaacgcgtgcagtcgcgt
tcggcgccgtcgttgcgcgacctcatgaaggatatgccacaacccgctccgccgccgccg
atcgcggctccggtggcgacaggggccgccagtgaacctgtaagtcccgagacgccgagg
acggaatcggggtctatgccgcccgcctccgcgcccccgtctttggctcagcctgcacct
tcggcgccgaatgaaaagccaagtccggcatcaggggtggaacctcgaagcgcagcgcag
ccggacagcgccgaaaatgccgtgtctcggcgcggacccgatgtttcacccggacattca
ccgcgcccgcccttcggcccgtcgttggaaccgcccgatcgggcggttgcgcagccgtcg
gtccgaggcacgcctcccgggcagccctatgctcccgcgccgcccgtgcgtgggctacat
cccggtgcgccgtcgccgattcagggcttttctggagatcttccgcgtccgcgacccacg
ggtggactgccgccgccgattccgttgccgctaggtcctggggcacctgggatgcgggcg
cccttcccgggtccgacattgcccgctccctcgcccatcgcgccgccagggccgctgcag
aacgattcggggcttcgagccgacgagcgcgtggatcaaccgcctgccggtgcgcctccg
gctgcgcaaccgcgtccgcaaccatcgagggagaaaggcgctggccgcaagcgcggcaga
ggcgcaaaagccgaaagcggacagcttgccgaaaatattccgcgagccatgcgtgtcggt
aaaacggagcgcgtagaagtccgcatcgcgaaagcttcgatcaagtctctggcggagaat
ctcgatgggggcggcgccgtctggcagcaccagattaccgtgacaaaggcgatggcggtg
cgcgttcgcgctccggacggcggctttttcatcgagacggcatcgcctgaaacgcaatgg
atcgaaagcaacctcggctatgggagcgacgattttgcgagctggcgatttctgatcacg
ccgcagtcgcgcggctggtcgcaattgcagattgtcgtatcggcccggacgatcggcgcg
gacggcgtggcggcagagacggcgcttcccgatcaagtcatcgaggtcaaagttcgccgg
aacctcaaacgtacgtttgcgcgcctctttagctggacggtcgcggcaatcattggtggc
gtgctttcgacgttcagtgagtcgggcctgacgactgcgaagaccttgctggaaaggctc
atccactag
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