Hyphomicrobium denitrificans 1NES1: HYPDE_41373
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Entry
HYPDE_41373 CDS
T02646
Name
(GenBank) sun protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdt03009
]
HYPDE_41373
Enzymes [BR:
hdt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HYPDE_41373
Ribosome biogenesis [BR:
hdt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HYPDE_41373
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
Methyltransf_11
FtsJ
Methyltransf_15
RsmF-B_ferredox
MTS
Methyltransf_12
Cons_hypoth95
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AGK59943
UniProt:
N0BAA0
LinkDB
All DBs
Position
3703179..3704579
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AA seq
466 aa
AA seq
DB search
MSKAMTNNRRARGAPMHDARTRLKSSASRAGSDGLPARDVAVSALFSVLIEKRPFDDVFA
KATATRALAARDRAFARLIATTVLRNRGSLQAVLKTYLEKPLPEHLGRLEQILLAAAAQL
LLLQTPPHAAISLAVDQCRADRNGRRFGNLVNAVLRRLSESGSGRLASLDNIMLTFPDWL
LDRWSRTYGVAEARQIARASLSEPPLDITVKSDAEEWASRLNGITLPTGSVRCSHVGRIE
DLEGYADGAWWVQDAAAALPVKLLGDVTGLSVLDLCAAPGGKTAQLAAGGARILAVDKSA
GRLARLQENLRRLGLSADVSVADAQSFTSETMFDVVLLDAPCTATGTIRRHPDILYLKRS
EDIAALAALQAKLLRQAARLVRPGGTLLYCTCSLEPEEGEHQIAAFLTERSDFRRQPIQL
DETVIPLLWRTADGDLRTLPSYFSELPEGIRGLDGFYAATLVKSDC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaaagcaatgactaacaaccggcgcgccaggggtgcgccgatgcatgatgctcgc
acccgactcaaatcatctgcttcacgagcgggtagcgatggattgccggcgcgtgacgtt
gccgtttcggcgctgttttccgtgcttattgaaaagcgcccgttcgacgatgtctttgca
aaggccacggcgacacgggcgctcgcggcgcgcgatcgcgcttttgcgcggctgatcgcg
acgacagttctgcgcaaccgcggttcgctgcaggcggtgctcaaaacgtaccttgagaag
cccttgcccgagcatctcggccggcttgaacagatccttctcgcggctgctgcgcaattg
ctgctccttcaaacgcctccgcatgccgccatttcactcgcggtcgatcagtgccgggcc
gatcgcaatgggcggcgcttcggcaatctcgtcaacgcggtgctccggcggttgagcgaa
agcggcagcgggcgtctcgcttccctcgacaatattatgctgacgtttccggattggctg
cttgacaggtggagtcggacttatggagttgccgaggcgcggcagatcgcgcgcgcttcg
ctctccgagccgccgctcgacatcactgtcaaatccgacgcggaggagtgggcgtcgcgt
ctcaacggcatcaccttgccgacggggtctgtgcgctgctcacatgtcggacgcatcgaa
gatctcgagggttatgcagatggcgcgtggtgggtacaggacgctgccgctgccttgccg
gttaagctcctcggagacgtgaccgggttgtccgtgctcgatctttgcgctgcgcccggc
gggaaaacggcgcagcttgcggcgggtggcgcgcgcattctcgccgtcgacaaatcggcg
ggacggttggcgcgtcttcaggaaaatcttcgacgcctcgggctctccgcggacgtttcg
gtagcagacgcgcaaagctttaccagcgagacgatgttcgatgtcgttcttctcgatgcg
ccgtgtaccgcgacagggacgatccgccgtcatcccgatatcctttacttgaagcgctcg
gaggatattgccgcactcgccgcattgcaggcgaagctgctgcggcaggcggctcggctc
gttaggcctggcggcacgctgctctactgcacgtgctcgcttgaacctgaagaaggcgag
catcagatcgcagcctttcttaccgagcgcagtgatttccggcgccagccgattcaactc
gatgagacggttattccactgctgtggcggacggccgatggcgatctcaggacgcttccc
tcttatttttcggagcttcccgaagggattcgtggacttgacggtttttacgcggcgacg
cttgtgaaatccgattgttaa
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integrated database retrieval system
