Hyphomicrobium denitrificans 1NES1: HYPDE_41573
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Entry
HYPDE_41573 CDS
T02646
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdt03021
]
HYPDE_41573
03009 Ribosome biogenesis [BR:
hdt03009
]
HYPDE_41573
Transcription machinery [BR:
hdt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HYPDE_41573
Ribosome biogenesis [BR:
hdt03009
]
Prokaryotic type
rRNA transcription factors
HYPDE_41573
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
DUF4332
KH_1
Motif
Other DBs
NCBI-ProteinID:
AGK59982
UniProt:
N0BCN7
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All DBs
Position
3742500..3744131
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AA seq
543 aa
AA seq
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MAMAGISANRLELLQIADAVAREKTIDKKIVIEAMEDAIQKAAKSRYGAENDIRCEIDPK
TGEAKLTRVLAVVDTVENDATQITVEDAKKRNPEAKAGDMIAETLPPLEFGRVAAQNAKQ
VIVQKVREAERDRQFAEYKDRVGDTTNGTVKRVEYGNVIVDLGRAEGIIRRDEMIPRENV
RLGDRIRAYIYDVRREQRGPQIFLTRARPEFMSSLFRAEVPEIYDGVVEIKSVARDPGSR
AKIAVISKDSSIDPVGACVGMRGARVQAVVNELQGEKVDIIQWNPDAASFIVNALAPAEV
TKVVLDEDSNRIEVVVPEAQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQKEFA
ERTQLLMDSLDVDEVIAQLLVTEGFASIEEVAYVDISEIAHIEGFDEGTAEQIQSRAREY
LEQQEAERDAKRRELGVADELAEIPGINTAMMVALGENGIKTVEDFADCATDELVGWTER
KKEKDAEPVKHKGILDGFELSRTDVENMIMAARVHAGWIKAEDLEKPAEGEPEAASDDAG
AQG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcaggcataagcgccaacaggcttgagcttttgcaaattgccgacgctgtc
gcgcgcgagaagacgatcgacaagaagatcgtcatcgaagcgatggaggatgccatccag
aaggctgccaaatcgcgctacggcgcggaaaatgacatccgctgcgagatcgatccgaag
acgggcgaagcgaagctgacgcgtgttcttgccgtcgtcgatacggttgagaacgacgcg
acgcagattaccgtcgaagacgccaaaaagcgaaaccccgaagccaaggccggcgacatg
atcgccgagacgttgccaccattggaattcggccgcgtcgccgcgcagaacgccaagcag
gtcatcgtgcagaaagtgcgcgaggccgaacgcgaccggcagttcgccgagtacaaggat
cgcgtcggcgataccacgaacggaacggtgaagcgggtcgagtacggcaacgtcatcgtc
gatctcggccgggccgagggcattatccgccgcgatgaaatgatcccgcgcgaaaacgtc
aggcttggtgatcgcatccgcgcctacatctatgacgttcgacgcgaacaacggggtccg
cagattttcctgacgcgagcgcgaccggaattcatgtcatcactgttccgcgcggaagtt
ccggagatttatgacggcgtcgtcgagatcaagtcggtcgcgcgcgatccgggaagccgg
gccaagattgcagtcatttcgaaggattcctcaatcgatccggtcggtgcctgcgtcggt
atgcgcggcgcgcgcgtgcaggccgtcgtcaacgagctgcagggcgagaaggtcgacatc
atccagtggaatccggatgcagcgagcttcatcgtcaacgcgctggcgcctgcggaagtc
acgaaggtcgtgctcgatgaagattccaaccgcatcgaggtcgtcgttcctgaagcgcag
ctgtcgcttgcaatcgggcggcgcggtcagaacgtgcggcttgcgtcacaactcaccggc
tgggacatcgacatcctgacggaacaggaagaaagcgaacgccgccagaaggaatttgcg
gaacgcacgcagttgctgatggattcactcgatgtcgacgaagtcatcgcgcagcttctc
gttacagagggatttgcgagtatcgaagaagtcgcttacgtcgatatttcggagatcgcc
cacatcgaaggatttgacgaaggaacagccgagcagattcaaagccgcgcgcgcgagtat
ctcgagcagcaggaagcagagcgcgatgcgaaacggcgcgagctcggcgttgcggatgaa
ctggcggaaattcccggcatcaatactgcgatgatggtggcgctcggcgagaacggcatc
aagaccgtcgaggattttgcggactgcgcgactgacgagctcgtcggctggacggagcgc
aagaaggagaaggacgccgagcccgtcaagcacaagggcattctcgatggcttcgagctt
tcgcgcacggacgtcgaaaacatgatcatggccgcgcgcgttcacgcgggttggatcaag
gcggaagatcttgagaagcctgcggaaggcgaacctgaagccgcgtcggatgacgccggc
gctcaaggctaa
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