KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_41573
Entry
HYPDE_41573       CDS       T02646                                 
Name
(GenBank) NusA antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hdt03021]
    HYPDE_41573
   03009 Ribosome biogenesis [BR:hdt03009]
    HYPDE_41573
Transcription machinery [BR:hdt03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     HYPDE_41573
Ribosome biogenesis [BR:hdt03009]
 Prokaryotic type
  rRNA transcription factors
   HYPDE_41573
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_2 KH_NusA_C DUF4332 KH_1
Other DBs
NCBI-ProteinID: AGK59982
UniProt: N0BCN7
LinkDB
Position
3742500..3744131
AA seq 543 aa
MAMAGISANRLELLQIADAVAREKTIDKKIVIEAMEDAIQKAAKSRYGAENDIRCEIDPK
TGEAKLTRVLAVVDTVENDATQITVEDAKKRNPEAKAGDMIAETLPPLEFGRVAAQNAKQ
VIVQKVREAERDRQFAEYKDRVGDTTNGTVKRVEYGNVIVDLGRAEGIIRRDEMIPRENV
RLGDRIRAYIYDVRREQRGPQIFLTRARPEFMSSLFRAEVPEIYDGVVEIKSVARDPGSR
AKIAVISKDSSIDPVGACVGMRGARVQAVVNELQGEKVDIIQWNPDAASFIVNALAPAEV
TKVVLDEDSNRIEVVVPEAQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQKEFA
ERTQLLMDSLDVDEVIAQLLVTEGFASIEEVAYVDISEIAHIEGFDEGTAEQIQSRAREY
LEQQEAERDAKRRELGVADELAEIPGINTAMMVALGENGIKTVEDFADCATDELVGWTER
KKEKDAEPVKHKGILDGFELSRTDVENMIMAARVHAGWIKAEDLEKPAEGEPEAASDDAG
AQG
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggccatggcaggcataagcgccaacaggcttgagcttttgcaaattgccgacgctgtc
gcgcgcgagaagacgatcgacaagaagatcgtcatcgaagcgatggaggatgccatccag
aaggctgccaaatcgcgctacggcgcggaaaatgacatccgctgcgagatcgatccgaag
acgggcgaagcgaagctgacgcgtgttcttgccgtcgtcgatacggttgagaacgacgcg
acgcagattaccgtcgaagacgccaaaaagcgaaaccccgaagccaaggccggcgacatg
atcgccgagacgttgccaccattggaattcggccgcgtcgccgcgcagaacgccaagcag
gtcatcgtgcagaaagtgcgcgaggccgaacgcgaccggcagttcgccgagtacaaggat
cgcgtcggcgataccacgaacggaacggtgaagcgggtcgagtacggcaacgtcatcgtc
gatctcggccgggccgagggcattatccgccgcgatgaaatgatcccgcgcgaaaacgtc
aggcttggtgatcgcatccgcgcctacatctatgacgttcgacgcgaacaacggggtccg
cagattttcctgacgcgagcgcgaccggaattcatgtcatcactgttccgcgcggaagtt
ccggagatttatgacggcgtcgtcgagatcaagtcggtcgcgcgcgatccgggaagccgg
gccaagattgcagtcatttcgaaggattcctcaatcgatccggtcggtgcctgcgtcggt
atgcgcggcgcgcgcgtgcaggccgtcgtcaacgagctgcagggcgagaaggtcgacatc
atccagtggaatccggatgcagcgagcttcatcgtcaacgcgctggcgcctgcggaagtc
acgaaggtcgtgctcgatgaagattccaaccgcatcgaggtcgtcgttcctgaagcgcag
ctgtcgcttgcaatcgggcggcgcggtcagaacgtgcggcttgcgtcacaactcaccggc
tgggacatcgacatcctgacggaacaggaagaaagcgaacgccgccagaaggaatttgcg
gaacgcacgcagttgctgatggattcactcgatgtcgacgaagtcatcgcgcagcttctc
gttacagagggatttgcgagtatcgaagaagtcgcttacgtcgatatttcggagatcgcc
cacatcgaaggatttgacgaaggaacagccgagcagattcaaagccgcgcgcgcgagtat
ctcgagcagcaggaagcagagcgcgatgcgaaacggcgcgagctcggcgttgcggatgaa
ctggcggaaattcccggcatcaatactgcgatgatggtggcgctcggcgagaacggcatc
aagaccgtcgaggattttgcggactgcgcgactgacgagctcgtcggctggacggagcgc
aagaaggagaaggacgccgagcccgtcaagcacaagggcattctcgatggcttcgagctt
tcgcgcacggacgtcgaaaacatgatcatggccgcgcgcgttcacgcgggttggatcaag
gcggaagatcttgagaagcctgcggaaggcgaacctgaagccgcgtcggatgacgccggc
gctcaaggctaa

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