Haemophilus ducreyi: HD_0223
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Entry
HD_0223 CDS
T00135
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03030
DNA replication
hdu03430
Mismatch repair
hdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HD_0223 (dnaQ)
03430 Mismatch repair
HD_0223 (dnaQ)
03440 Homologous recombination
HD_0223 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdu03032
]
HD_0223 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_0223 (dnaQ)
Enzymes [BR:
hdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HD_0223 (dnaQ)
DNA replication proteins [BR:
hdu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HD_0223 (dnaQ)
DNA repair and recombination proteins [BR:
hdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HD_0223 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AAP95211
UniProt:
Q7VP76
LinkDB
All DBs
Position
complement(161456..162226)
Genome browser
AA seq
256 aa
AA seq
DB search
MSEPQIIRQVVLDTETTGMNFNGPPQIGHNIIEIGAVELINRRLTGRTFHVYIKPPREVE
EEAIKVHGITNAFLQDKPTFAEIAHEFLAFIQGAELIIHNAPFDVAFIDQEFSSLVNPPS
KTAEMCTVTDTLQMARKMYPGKRNNLDALCDRLGIDNSKRVLHGALLDAEILADVFLMMT
GGQLALLTEEEHSHTQQQRETSLAVKEHFDTSGLIVLQLSQEECQAHQEYLALLDKKSKG
NCLWNMLTKAESEAKH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccgcaaataatccggcaagtcgtattagatactgaaacgacaggaatgaat
tttaatggcccgccacaaattgggcataacattatcgaaataggcgcagtagaactaatc
aatcgccgtttaactggccgtactttccacgtttatataaagccgccccgcgaagttgaa
gaagaagcaattaaagtacacggcatcactaatgcatttttacaagacaagcccaccttt
gctgaaattgcacacgaatttctagcgttcattcaaggtgcagaattaattattcataat
gcgcccttcgatgtggcctttatcgatcaagaattttcctcgctcgtaaatccacctagc
aaaacggctgaaatgtgtacggttactgacactttacaaatggcacgtaaaatgtatcca
ggtaaacgtaataacttagatgcgctttgtgaccgcttgggaattgataatagcaaacgt
gtactacatggtgctttactcgatgcggagattttagctgatgtttttctaatgatgaca
ggtggacaactagcattattaacggaagaagaacattcccatacacaacaacagcgtgaa
acatctctagcagtaaaagaacattttgatacaagcggactaattgtattgcaattaagc
caagaagaatgtcaagcacatcaagaatatttagcgctactcgataaaaaatccaaaggc
aattgtctttggaacatgctaacaaaagcagaatctgaagctaaacattaa
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