Haemophilus ducreyi: HD_0475
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Entry
HD_0475 CDS
T00135
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HD_0475 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdu03019
]
HD_0475 (recQ)
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_0475 (recQ)
Enzymes [BR:
hdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HD_0475 (recQ)
Messenger RNA biogenesis [BR:
hdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HD_0475 (recQ)
DNA repair and recombination proteins [BR:
hdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HD_0475 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
SecA_DEAD
Hanta_Gn-B
SKI
Motif
Other DBs
NCBI-ProteinID:
AAP95432
UniProt:
Q7VNM7
LinkDB
All DBs
Position
373282..375087
Genome browser
AA seq
601 aa
AA seq
DB search
MQELFSKAKDVLNNIFGYQHFRNGQQEVIEAVLTGQDCLVIMTTGGGKSLCYQVPALCLE
GITLVISPLISLMKDQVDQLLTYGIEAGYINCSQTFEEQQRVEQKALSGQLKLLYLSPEK
VMTQAFFSFIFHCKISLIVVDEAHCVSQWGHDFRPEYALLGRLRKTFVGIPLMALTATAD
PTTRKDILQHLCLTNPYTYLGSFDRPNIRYTVQQKFKPLEQLTQFILRQQGKSGIIYCNS
RKKVEEISEKLAARKISVMGYHAGMPVQQREMVQEAFQRDNIQIVVATIAFGMGINKSNV
RFVVHFDLPRSIEAYYQETGRAGRDDLPSEAVLFYNPSDYAWMEKTLLEEPETDQRQIKQ
HKLQAIGAFAESQTCRRLVLLNYFGESRQAPCQNCDICLNPPRQYDGTLDAQKVLSVIYR
TGQMFGVQHIIAVLRGMNNQRIREFNHDQLSVYGIGKDQSAPYWLSIIHQLIHLGLIKQN
ITNHSSLQLTEEARPVLRSQKLALAMPRLTFSANAYIQKQASVRYDKDLFARLRFLRKQI
ADKENIPPYVVFNDATLQEMAEYLPLSNVEMLEINGVGERKLERFGGAFLNLIKEHCQNR
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaactattttctaaggcaaaagatgttttaaataacatttttggttatcaacat
ttccgcaacggacaacaagaagttattgaagccgtattaactggacaagattgtttagtt
attatgacaaccggtggtggaaaatcactttgttatcaagtccctgcactttgtctagag
ggaattacattagttatatccccgcttatttcgttgatgaaagatcaagtggatcaatta
ctcacttatggtattgaagcgggttatatcaattgctcccaaacatttgaagagcaacaa
cgtgtcgaacagaaagccttatctggtcagttaaaattactctacctttcacccgagaaa
gtgatgacccaagctttcttttcttttatttttcattgcaaaattagtttaattgtcgtt
gatgaggcgcattgtgtttcacagtgggggcatgactttcgtcctgaatatgcattatta
ggtagattacgtaagacttttgtcggtattccattaatggctttgacggcaaccgctgat
ccaactacgcgtaaggatattctacagcatttatgtttaacgaatccttatacttaccta
ggtagttttgatcggcctaatatccgttatacagtacagcaaaaatttaaaccactagaa
caactaacgcaatttattttaagacagcaggggaaaagcggtattatttattgtaatagc
cgcaaaaaagttgaagaaatcagtgaaaagcttgcagcacgaaaaatctcagtaatggga
tatcacgcaggaatgcctgtacaacaacgggaaatggtccaagaagcgtttcagcgagac
aatatccaaattgtagtagcaacaattgcctttggtatggggattaataaatcaaatgta
cgttttgttgttcattttgatttgccacgtagtattgaggcctattaccaagaaacagga
cgagcagggcgtgatgatctgccttctgaagcagtactattttacaacccaagtgattat
gcttggatggagaaaaccttattagaagagcctgaaacagatcagcgccaaattaaacaa
cataaattacaagcaataggtgcatttgctgaatcgcaaacgtgccgtcggttagtgtta
ttaaattattttggcgaatctcgccaagcaccttgtcagaattgtgatatttgtttaaat
ccaccccgccagtatgatgggactttagatgcacagaaagtgttatctgttatttatcgt
acagggcaaatgtttggtgtacagcatattattgccgtgttacgtggaatgaataatcaa
agaatccgagagtttaaccacgatcagctatctgtctatgggattggcaaagatcaatct
gcgccgtattggttaagtattattcatcaacttattcatttaggtttaattaagcaaaat
attactaatcattcatcattacaattgacagaagaagcacgcccagtgttgcgttcgcaa
aaattagcgttggcaatgccacgcttaactttttctgccaatgcgtatattcaaaaacaa
gcctcagtgcgttacgacaaagatttatttgcacgtctgcgtttcttacgtaaacagatt
gccgataaagagaatatccctccttatgttgtattcaatgacgcaactttgcaagaaatg
gcggaatatcttccgcttagtaacgtagaaatgctagaaattaatggtgtaggtgagcga
aaattagagcgttttggtggcgcatttttgaatttgattaaagaacattgtcagaataga
aaatga
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