Haemophilus ducreyi: HD_0604
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Entry
HD_0604 CDS
T00135
Symbol
pcnB
Name
(GenBank) polyA polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HD_0604 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdu03019
]
HD_0604 (pcnB)
Enzymes [BR:
hdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HD_0604 (pcnB)
Messenger RNA biogenesis [BR:
hdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HD_0604 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF5600
Motif
Other DBs
NCBI-ProteinID:
AAP95534
UniProt:
Q7VNE5
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All DBs
Position
463910..465481
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AA seq
523 aa
AA seq
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MIVIFSLFRTRWIIFNYIKSLFSRQKKAKKQPLVTPEMADMGLVTSNKAGKWRAKPTKSK
GSEALAKRNKKQSELTVAHQLHKKFTVSANHYQIYPKDFPKNALAIVEKLDKAGYEAYLV
GGCIRDLLLGHKAKDVDIATNAKPEEIQKIFGRQCRLIGRRFRLAHIVFGREIYEVATFR
ADHSITASDKISKISDQGMLLRDNVYGSLSDDAERRDFTVNALYYDPKRQLIFDFFDGIN
DLKHAKLRLIGNPVTRYQEDPVRMLRAVRFMAKLDMFLDKPSDAPIYELASLLKNIPAAR
LFDESLKLLQSGQGFKTYQLMRQYGLFEQLFPVLTPFFTAQNDSQVERMLNKALTATDER
IRDRLHVNPAFLFAALLWYPLREKMDVLKNEGGLNNYDAMMLAANDILAESCKAIALHRR
HTAVIREIWALQFQFVKRTGKRPLQTLEHVKFRAAFDLLVMRAEIEGGDLVELSAWWHEF
QFSNDHQRVEMLKTARYLPQTEHKKRRRKTFRKKKTSRKRHLS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgattgttattttttcattattcaggacgaggtggattatttttaactacattaagtcg
ttattttcacgacaaaaaaaagctaaaaaacaaccgcttgtaacgccagaaatggctgat
atgggtttagtaactagcaataaagcgggtaaatggcgagctaaaccaacaaaatctaaa
ggcagtgaagccttagcaaagcgaaataaaaaacaatcagaattaacggttgcccatcag
ttacataaaaaattcaccgtaagtgcgaaccattatcaaatctatccgaaagatttcccg
aaaaacgccttagctattgtagagaagttagacaaagccggttatgaggcttatctagtg
ggtgggtgtatccgtgatttattattaggtcataaagcaaaagatgtggatattgccact
aatgctaaacctgaagaaattcagaaaatctttgggcgacaatgtcgtttaattgggcgc
cgttttcgtttagcacatattgtgtttggtcgagaaatatatgaggttgctacttttcgc
gctgatcacagtatcactgcgagcgataagatctctaaaatcagtgatcaaggaatgtta
ttacgtgataacgtgtatggctcattaagcgatgatgcagaacggcgtgattttactgta
aatgcactttactatgatccaaaacggcagttaatttttgattttttcgatggcattaat
gatttaaaacacgctaagttgcgcttaattggtaatccggtgacacgttatcaagaagat
ccggtaagaatgttacgcgcggtgcgatttatggctaaattggatatgttcttagataag
cctagtgatgcacctatttatgaattggcgtctttgctgaaaaatattccagccgcgcgt
ttatttgatgaatcattgaagttattgcaatcaggtcaaggttttaaaacttatcaatta
atgcgtcaatatggattgtttgaacagttattcccagtgttaaccccctttttcaccgca
cagaatgattcacaagtagagcggatgttgaacaaagcattaacagcaacagatgagaga
attcgtgatcgtttgcatgttaaccctgcttttttatttgctgcgttattatggtatcca
ctacgtgaaaagatggatgttttaaaaaatgaaggtggtttgaataattatgatgcaatg
atgttggcggctaatgatattttggcagagagctgtaaagcgattgccctgcatcgtcgt
catactgctgttattcgtgagatttgggcattacaatttcagtttgtaaaacgtaccggg
aaacgtcctctacagacgttggaacatgttaaattccgtgcagcctttgatttattagtg
atgcgagcagaaattgagggtggggatttagttgaattatcggcgtggtggcatgagttt
caatttagtaatgatcaccaacgggttgaaatgttgaaaaccgcccgctatttaccgcaa
actgagcataaaaaacggcgtcgtaaaacatttagaaagaaaaaaacgtcacgaaaacgc
cacttatcgtaa
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