Haemophilus ducreyi: HD_1032
Help
Entry
HD_1032 CDS
T00135
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03420
Nucleotide excision repair
hdu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HD_1032 (uvrD)
03430 Mismatch repair
HD_1032 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_1032 (uvrD)
Enzymes [BR:
hdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HD_1032 (uvrD)
DNA repair and recombination proteins [BR:
hdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HD_1032 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HD_1032 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
AAP95910
UniProt:
Q7VME6
LinkDB
All DBs
Position
821593..823782
Genome browser
AA seq
729 aa
AA seq
DB search
MDFSLLLDGLNDKQRQAVSAPLGNYLVLAGAGSGKTRVLTHRIAWLMRVEHISEASILAV
TFTNKAAAEMRNRIEYTLSMSSQHRLFGMWVGTFHSIAHRLLRSHYLDANLPQDFQIMDT
EDQLRLLKRLLKLHNFDEKYFPPKQVAWYINAQKDKGMRAKDINHHNDANEKKLIQIYQI
YQEACDRAGLLDFAELLIRAYELFKNNRVILERYQHRFQQILIDEFQDTNHIQYDLIQLL
AGKTGNVVIVGDDDQSIYGWRGAQVENIQRFLQDYRQAQTIRLEQNYRSTGHILASANQL
IANNNDRLGKNLWTDKGDGDPVDIYCAFNELDEARFVASQIKQWKEEQGSLNDCAILYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLISNRDDDAAFERVINTPPR
GIGDRTLEGLRQLTRSRQVTLWQAVQIAIQEQHLSARAASALLRFVELINALEQETTQMS
LCEQTDFVIKTSGLYEMYKQEKGEKGEVRIENLAELVTATKEFCKPDDAIELSDLTAFLT
HASLEAGENQASLHQDYVELMTLHAAKGLEFPRVFIVGMEEGLFPSGISFDEGRLPEERR
LAYVGITRAKQRLTISYAELRRLYGKEERHIASRFIAELPAEHIREVRLRGSINRAASFT
QSGAHSIKTTANCLADSEWQMGQKVNHAKFGQGTVINVEGSGDATRLQIAFAGNGIKWLI
AKMANLVKL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctttattattagatggattgaatgataaacaacggcaggcagtttcagca
cctttaggtaattatttagtgcttgcaggggcaggctctggcaaaacgcgggtattaacg
catagaattgcttggttaatgagagttgaacatatatcagaagcgagtattttagcggtc
acttttaccaataaagccgcagccgaaatgcgaaaccgtattgaatataccttatcaatg
agtagccaacatcgtttatttggtatgtgggtgggcactttccatagtattgcacatagg
ttgcttcgttcgcattatcttgatgcaaatttgccacaagattttcaaattatggataca
gaagatcaattacggttactaaaacgtttattgaagttacataattttgatgaaaaatat
ttcccgccaaagcaagtcgcttggtatatcaatgcacaaaaagataaaggaatgcgggca
aaggatataaatcaccataacgatgctaatgagaaaaagttaatccaaatttatcaaatt
tatcaagaggcttgtgatcgtgcaggtttattagactttgctgaattattaattcgtgct
tatgaattatttaaaaataaccgagtgattttagagcgttatcaacaccgctttcagcaa
attttaattgacgaatttcaagacactaaccatattcaatatgatttgattcagctactt
gcgggtaaaaccggcaatgtggtgattgttggtgatgatgatcaatccatttatggctgg
cgaggtgcacaagttgaaaatattcaacgctttttgcaagattatcgtcaagcacaaaca
attcgtttagagcaaaattatcgttctacaggccatattctggcatcagctaatcaatta
attgccaacaataatgaccgcttaggcaaaaatctttggacagataaaggcgacggcgac
cccgttgatatttactgtgcatttaacgaattagatgaggcacgctttgttgcatcgcag
atcaaacagtggaaagaagagcaaggtagcttaaatgattgtgcgatactttaccgtagt
aatagccaatcacgcgtcattgaagaagccttaattcaggcgaatattccttatcgaatt
tatggcggaatgcgtttttttgaacggcaagaaattaaagatgcgttagcttatttacgt
ttgatcagcaatcgtgatgatgatgcagcatttgagagagtgattaatacaccgccaaga
ggcataggcgatcgcacattggaaggattgcgtcaattgactcgtagccggcaagtaacg
ctatggcaagcggttcaaattgctattcaagaacaacatctctctgcgcgtgctgcctcc
gcattgttgcgttttgttgaactgattaatgcgcttgagcaagaaaccacgcaaatgtca
ctctgtgaacaaactgattttgtgattaaaacatcaggtttatacgagatgtataaacaa
gaaaaaggcgaaaagggcgaagtgcggattgaaaacttagcagagcttgttactgccacc
aaagagttttgcaagcctgatgatgcaattgagctatcagatctgaccgctttcctaacg
catgcatcactagaagcgggagaaaatcaagcatcactgcaccaagattatgttgaatta
atgacattacatgcagcaaaagggctagagtttccaagagtctttatcgtgggaatggaa
gaaggtcttttccctagtggcatcagttttgatgaaggccgattaccagaagaacgtcgt
ttagcttatgtaggtatcacgcgtgctaagcaaagacttaccattagttatgcagaatta
cgccgcttatatggcaaagaagaacggcatatcgcttcccgctttattgctgagttacct
gctgaacatatccgagaagtccgtttgcgcggcagtatcaatcgtgctgcaagtttcacg
caatctggcgctcattcaataaaaacaaccgctaattgcttagctgatagtgagtggcaa
atggggcaaaaagtcaatcacgctaagtttggacaaggcacggtgattaatgttgaaggt
agtggtgatgcgacacggttacaaattgcttttgctggcaatggaattaaatggttgatc
gccaagatggcaaatttagtcaagttataa
DBGET
integrated database retrieval system