KEGG   Haemophilus ducreyi: HD_1032
Entry
HD_1032           CDS       T00135                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hdu  Haemophilus ducreyi
Pathway
hdu03420  Nucleotide excision repair
hdu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hdu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HD_1032 (uvrD)
   03430 Mismatch repair
    HD_1032 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hdu03400]
    HD_1032 (uvrD)
Enzymes [BR:hdu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HD_1032 (uvrD)
DNA repair and recombination proteins [BR:hdu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HD_1032 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     HD_1032 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 PhoH
Other DBs
NCBI-ProteinID: AAP95910
UniProt: Q7VME6
LinkDB
Position
821593..823782
AA seq 729 aa
MDFSLLLDGLNDKQRQAVSAPLGNYLVLAGAGSGKTRVLTHRIAWLMRVEHISEASILAV
TFTNKAAAEMRNRIEYTLSMSSQHRLFGMWVGTFHSIAHRLLRSHYLDANLPQDFQIMDT
EDQLRLLKRLLKLHNFDEKYFPPKQVAWYINAQKDKGMRAKDINHHNDANEKKLIQIYQI
YQEACDRAGLLDFAELLIRAYELFKNNRVILERYQHRFQQILIDEFQDTNHIQYDLIQLL
AGKTGNVVIVGDDDQSIYGWRGAQVENIQRFLQDYRQAQTIRLEQNYRSTGHILASANQL
IANNNDRLGKNLWTDKGDGDPVDIYCAFNELDEARFVASQIKQWKEEQGSLNDCAILYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLISNRDDDAAFERVINTPPR
GIGDRTLEGLRQLTRSRQVTLWQAVQIAIQEQHLSARAASALLRFVELINALEQETTQMS
LCEQTDFVIKTSGLYEMYKQEKGEKGEVRIENLAELVTATKEFCKPDDAIELSDLTAFLT
HASLEAGENQASLHQDYVELMTLHAAKGLEFPRVFIVGMEEGLFPSGISFDEGRLPEERR
LAYVGITRAKQRLTISYAELRRLYGKEERHIASRFIAELPAEHIREVRLRGSINRAASFT
QSGAHSIKTTANCLADSEWQMGQKVNHAKFGQGTVINVEGSGDATRLQIAFAGNGIKWLI
AKMANLVKL
NT seq 2190 nt   +upstreamnt  +downstreamnt
atggatttttctttattattagatggattgaatgataaacaacggcaggcagtttcagca
cctttaggtaattatttagtgcttgcaggggcaggctctggcaaaacgcgggtattaacg
catagaattgcttggttaatgagagttgaacatatatcagaagcgagtattttagcggtc
acttttaccaataaagccgcagccgaaatgcgaaaccgtattgaatataccttatcaatg
agtagccaacatcgtttatttggtatgtgggtgggcactttccatagtattgcacatagg
ttgcttcgttcgcattatcttgatgcaaatttgccacaagattttcaaattatggataca
gaagatcaattacggttactaaaacgtttattgaagttacataattttgatgaaaaatat
ttcccgccaaagcaagtcgcttggtatatcaatgcacaaaaagataaaggaatgcgggca
aaggatataaatcaccataacgatgctaatgagaaaaagttaatccaaatttatcaaatt
tatcaagaggcttgtgatcgtgcaggtttattagactttgctgaattattaattcgtgct
tatgaattatttaaaaataaccgagtgattttagagcgttatcaacaccgctttcagcaa
attttaattgacgaatttcaagacactaaccatattcaatatgatttgattcagctactt
gcgggtaaaaccggcaatgtggtgattgttggtgatgatgatcaatccatttatggctgg
cgaggtgcacaagttgaaaatattcaacgctttttgcaagattatcgtcaagcacaaaca
attcgtttagagcaaaattatcgttctacaggccatattctggcatcagctaatcaatta
attgccaacaataatgaccgcttaggcaaaaatctttggacagataaaggcgacggcgac
cccgttgatatttactgtgcatttaacgaattagatgaggcacgctttgttgcatcgcag
atcaaacagtggaaagaagagcaaggtagcttaaatgattgtgcgatactttaccgtagt
aatagccaatcacgcgtcattgaagaagccttaattcaggcgaatattccttatcgaatt
tatggcggaatgcgtttttttgaacggcaagaaattaaagatgcgttagcttatttacgt
ttgatcagcaatcgtgatgatgatgcagcatttgagagagtgattaatacaccgccaaga
ggcataggcgatcgcacattggaaggattgcgtcaattgactcgtagccggcaagtaacg
ctatggcaagcggttcaaattgctattcaagaacaacatctctctgcgcgtgctgcctcc
gcattgttgcgttttgttgaactgattaatgcgcttgagcaagaaaccacgcaaatgtca
ctctgtgaacaaactgattttgtgattaaaacatcaggtttatacgagatgtataaacaa
gaaaaaggcgaaaagggcgaagtgcggattgaaaacttagcagagcttgttactgccacc
aaagagttttgcaagcctgatgatgcaattgagctatcagatctgaccgctttcctaacg
catgcatcactagaagcgggagaaaatcaagcatcactgcaccaagattatgttgaatta
atgacattacatgcagcaaaagggctagagtttccaagagtctttatcgtgggaatggaa
gaaggtcttttccctagtggcatcagttttgatgaaggccgattaccagaagaacgtcgt
ttagcttatgtaggtatcacgcgtgctaagcaaagacttaccattagttatgcagaatta
cgccgcttatatggcaaagaagaacggcatatcgcttcccgctttattgctgagttacct
gctgaacatatccgagaagtccgtttgcgcggcagtatcaatcgtgctgcaagtttcacg
caatctggcgctcattcaataaaaacaaccgctaattgcttagctgatagtgagtggcaa
atggggcaaaaagtcaatcacgctaagtttggacaaggcacggtgattaatgttgaaggt
agtggtgatgcgacacggttacaaattgcttttgctggcaatggaattaaatggttgatc
gccaagatggcaaatttagtcaagttataa

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