Haemophilus ducreyi: HD_1052
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Entry
HD_1052 CDS
T00135
Name
(GenBank) probable pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hdu
Haemophilus ducreyi
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdu03009
]
HD_1052
Enzymes [BR:
hdu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HD_1052
Ribosome biogenesis [BR:
hdu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HD_1052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AAP95926
UniProt:
Q7VMD1
LinkDB
All DBs
Position
837343..838407
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AA seq
354 aa
AA seq
DB search
MTTFHKKAANKRPVSFKSRQQDDITSFKKSENKAHKSQSVKNRSKAVANSVAKSTLKLPA
SEQMLQDKKTKIVGEKLQKILARAGQGSRRELEEVIAAGRVSVDGKIASLGDRVHVNATT
KIRIDGTLINLVTAQKEICRVLMYYKPEGELCTRADPEGRATVFDRLPRLSGSRWIAVGR
LDINTSGLLLFTTDGDLANRLMHPSHEVEREYSVRVFGQVDDAMLQRLRKGVQLEDGPAN
FKQIKAVGGTGLNQWFDVTLTEGRNREVRRLWESQGVEVSRLIRIRYGNIKLEKGLPRGG
WEEMGLEQVNYLRDLVGLPAETETKVDVTKNRRRTNIRQIRKAVKQHSKYRTKN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttcacaaaaaagcagctaacaagcgccctgtttctttcaaaagcagacaa
caagatgatataacctcttttaaaaagagtgaaaataaagcgcataaaagccagtctgtt
aagaatcgaagtaaagcggtggctaattcagttgcaaaatcaacgctaaaattacccgct
tctgagcaaatgctacaggataaaaaaaccaagatagtcggtgagaaattacaaaaaatc
ttagcgcgggcagggcaaggatctcgccgtgagttagaagaagtcattgcagctgggcgt
gtgagtgttgatggtaagattgcctcgttaggtgatcgggtacacgttaatgctacgact
aaaatccgtattgatggtactttaattaacttagtgactgctcaaaaagaaatttgtcgt
gtattaatgtattacaagcctgaaggtgaactttgtacccgtgccgatccggaaggtcgc
gctacagtatttgatcgcttaccgcgtttaagtggttcgcgttggattgcagtaggtcgt
ttagatattaacacttcagggttattattatttactacagatggcgatttggccaaccgt
ttaatgcatccaagccatgaagtggaacgtgaatattcggtgcgtgtttttgggcaggtt
gatgacgcgatgttgcaacgtttacgtaaaggcgtgcaattggaagatggtccggcaaac
tttaagcaaattaaagctgttggtggcacaggtctaaaccaatggtttgatgtaacactc
actgaaggacgaaatcgggaagtccggcgtttatgggaatctcaaggtgtagaagttagc
cgtttgattcgtattcgctatggtaatattaagttagaaaaaggtttaccgcgtggtggt
tgggaagagatgggattagagcaagtcaactatttgcgtgatctagtgggtttacctgca
gaaacagagacaaaagtagatgtgactaaaaatcgtcgtcgtactaatatccgtcaaatt
cgtaaggcagtaaaacagcattcaaaatatcgaacaaaaaattaa
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