Haemophilus ducreyi: HD_1062
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Entry
HD_1062 CDS
T00135
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HD_1062 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_1062 (nfo)
Enzymes [BR:
hdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HD_1062 (nfo)
DNA repair and recombination proteins [BR:
hdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HD_1062 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AAP95933
UniProt:
Q7VMC4
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All DBs
Position
844116..844961
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AA seq
281 aa
AA seq
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MKYIGAHVSAAGGVENAVLRAVEIGGNAFALFTKNQRQWQAATLKAETIEKFKRFCQVHQ
FTADQILPHDSYLINLGHPELENRQKSVAAFIDEMQRVNQLGLKLLNFHPGSHLNKISER
DCLAYIAESINIAIKTVPNVVAVIENTAGQGSNMGYRFEHLAEIIEQVEDKSRVGVCLDT
CHLFSAGYDISSWQACEKTFTDFDQIVGYAFLRGMHLNGSKTALGSRVDRHHCLRDGTIG
TAVFEYIMQHHQFDHIPLILETIQPEIWAEEIQFLRDLSAK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattggcgctcacgttagcgcagcgggcggtgttgaaaatgcggtattacgt
gccgtagaaattggtggtaatgcttttgcattatttactaaaaatcagcgacaatggcag
gcagctacattaaaagcagaaacgatcgaaaaatttaaacgtttttgccaagtgcatcaa
tttacggctgatcagattttaccgcacgatagttatttaattaatcttggtcatcctgaa
ttagagaatcgccaaaaatcagtggcggcgtttattgatgaaatgcaacgggtcaatcaa
ttaggcttaaaattattaaattttcatccgggatcgcatttgaataagatctctgagcga
gattgtttagcgtatattgcagaatcaattaatattgcgatcaaaacggtgcctaatgta
gtcgcagtgattgaaaatacagcagggcaaggatcgaatatgggctatcgttttgaacat
ttagcggaaattattgaacaagttgaagataaaagccgagtgggcgtatgtttagatact
tgccacctattttctgccggatatgatattagttcttggcaggcgtgtgagaaaaccttt
accgattttgatcaaattgttggttatgctttcttacgtggtatgcatttaaatggttcg
aaaacggcactaggtagccgcgttgatcggcatcattgtttaagggatggtaccattggt
acggcagtgtttgaatatataatgcaacatcatcaatttgaccatatcccattgattttg
gaaacgattcaaccagaaatttgggcggaagaaatccagtttttacgcgatttatcggct
aaataa
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