Haemophilus ducreyi: HD_1066
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Entry
HD_1066 CDS
T00135
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HD_1066 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_1066 (ung)
Enzymes [BR:
hdu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HD_1066 (ung)
DNA repair and recombination proteins [BR:
hdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HD_1066 (ung)
Prokaryotic type
HD_1066 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Virulence_RhuM
Motif
Other DBs
NCBI-ProteinID:
AAP95937
UniProt:
Q7VMC0
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All DBs
Position
846314..846985
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AA seq
223 aa
AA seq
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MNSWTEAIGEEKVQPYFQQLLQQVYQARASGKIIYPPQHEVFSAFALTDFKAVKVVILGQ
DPYHGPNQAHGLAFSVKPSVVPPPSLVNIYKELAQDIAGFQVPSHGYLIDWAKQGVLLLN
TVLTVQQGMAHSHATLGWEIFTDKVIAQLNDHRENLVFLLWGSHAQKKGQFINRSRHCVL
TAPHPSPLSAHRGFFGCQHFSKANAYLQSKGIATINWQLPLVV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttggaccgaagcgattggtgaggaaaaagtacagccatattttcaacagctt
ttgcaacaagtatatcaagcacgtgcgagtggtaaaattatttatccaccgcaacatgag
gtttttagtgcttttgcattgactgactttaaggcggttaaggttgtcattttgggccaa
gatccttatcacggtcctaatcaagcgcatggtttagcgttttctgtgaaaccgtctgtt
gtaccgcctccatcattagtgaatatatataaagaattagctcaagatattgccggtttt
caggttcctagccatggctatttaatcgattgggcaaaacaaggggtgttattactcaac
acagtgttgactgttcaacaaggaatggcgcattctcacgctaccttggggtgggaaata
ttcacggataaagtgattgcgcaattgaatgatcatcgagaaaacctagtctttttattg
tggggaagtcatgcgcagaagaaggggcaatttattaatcgatcacgccattgtgtttta
acggcgccccatccatcgccattgtctgctcatcgaggctttttcggttgtcagcatttt
tctaaagcgaatgcatacttacaaagtaagggcattgctaccattaattggcaattaccg
ttagttgtgtga
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