Haemophilus ducreyi: HD_1130
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Entry
HD_1130 CDS
T00135
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03030
DNA replication
hdu03430
Mismatch repair
hdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HD_1130 (holA)
03430 Mismatch repair
HD_1130 (holA)
03440 Homologous recombination
HD_1130 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdu03032
]
HD_1130 (holA)
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_1130 (holA)
Enzymes [BR:
hdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HD_1130 (holA)
DNA replication proteins [BR:
hdu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HD_1130 (holA)
DNA repair and recombination proteins [BR:
hdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HD_1130 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
Blo-t-5
TIG_plexin
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AAP95992
UniProt:
Q7VM68
LinkDB
All DBs
Position
complement(897099..898124)
Genome browser
AA seq
341 aa
AA seq
DB search
MQKVFPEALTHHLSKSLSPFYLLTGNDLLLLNESKAQIIHAAKAVEFDEIQEITINNETK
WEQLFESVQNFGLFFSRQIIILNLPENPTTAQMNHIAKLAGLINADLMLILCLTKFSKAM
EKQAWFTQMDAKLVQVSCQTPDINRLPIWLANRAKMMGLQLEVEVVQLLAYSYEGNLIAL
QQTLQQLQLRTHDGKITLPQAKEIIEQFAQFTPFQWIDALLEGKIARAIRILKYLKDEEI
QVVMLLRIVQKELLILLEITRSPAAILTSQQALYVGNLRAEFDRLKIWQNRRPFYQSAIQ
RLSYKKLYLLIQQLAELEKQTKHIFSEQIWLELEHFSTLFE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagtttttcctgaagcgcttactcaccatttatcaaaaagcctctcacccttt
tacttactgacgggcaacgatctactgttgctaaatgaaagtaaagcccaaattattcat
gcagctaaagcggtagaatttgatgaaatacaagaaattacgattaataatgaaaccaaa
tgggagcaactcttcgaatctgtccaaaatttcggtctattttttagccgtcaaattatc
attctaaatctgccagaaaatccaacaaccgcacaaatgaaccatattgctaaactcgcc
gggttgattaatgctgatctaatgctgattttatgcttaactaaatttagtaaagcgatg
gaaaaacaagcttggtttacacaaatggacgctaaactcgtacaagtcagctgtcaaaca
cctgatattaatcgattacccatttggttagctaatcgggctaaaatgatgggattacag
ctagaagtagaagtagtgcaattattggcatacagctatgaaggtaatttaattgcgcta
caacaaaccttacaacagctacaactgcgtactcatgatggtaaaataacattaccacaa
gcgaaagaaattattgaacaatttgcacaatttacgccttttcaatggattgatgcctta
ttagaaggcaaaattgcacgtgctattcgaatactcaaatatttaaaagatgaagaaata
caagtggttatgctactcagaattgtgcaaaaagaactgttaattctattggaaataaca
cgttcaccagccgcaatcttaactagccaacaagcactttatgtgggtaatttaagagcc
gaattcgaccgcttaaaaatatggcaaaatcgtcgtccattctatcagagtgctattcaa
cggcttagctataaaaagctgtatctgcttattcaacaactcgctgaattagaaaaacaa
actaaacacatatttagcgaacaaatttggttagaactagaacatttttctacgctattt
gaatag
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