Haemophilus ducreyi: HD_1264
Help
Entry
HD_1264 CDS
T00135
Symbol
rnb
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hdu
Haemophilus ducreyi
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdu03016
]
HD_1264 (rnb)
Enzymes [BR:
hdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HD_1264 (rnb)
Transfer RNA biogenesis [BR:
hdu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HD_1264 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF3153
Motif
Other DBs
NCBI-ProteinID:
AAP96092
UniProt:
Q7VLX8
LinkDB
All DBs
Position
complement(1026086..1028065)
Genome browser
AA seq
659 aa
AA seq
DB search
MFQNNPLLAQLKQQIEANKEYVEGKVKASDKNFGFLEADKKSYFIPPLEMKKVMHGDNVK
AVIKREGDKESVEIDSLIDPMLDRFIARVRFNKDGKLQLAVDHPQIRLNIPATTHKKVTE
QLANDDWVVAQLKSHPLRDDRFFFAQVTEFICKADDHFAPWWVTLARHQQPRESVKTEQS
YTLQDQSPREDLSHLYFTTIDSPSTQDMDDALFIEPITENAIQQGWRLVVAIADPTAYIA
EDSNIEHAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNKKRPALVVYIETDLNGNLIK
DASFHTAWVESKAKLAYDNVSDYLEGVEQAWQPDCAELKQQIYWLHQFTQARIQWRSKNA
LLFKEQMDYNFELNADGSVKSIQIQYHRIANQIIEEAMIIANICCAQFLAKHAKTGIFNS
HAGFDPKNYEAVQTFLLNTLATDENRSELTDLFSPTQLATLDGYCAMRRYIEDFPEKFLE
LRLRRYLTFAEFKAEVAPHFGLGISHYATWTSPIRKYGDIVNHRLIKQVLLNQPIKHIES
TILARLQEARRQNRLVERDIADWLYARYLLPIATQGVEFDCEITDISRGGIRAKVLENGA
QIFIPCSTLHENKDEIDFIPEEIALYTKGEKIYQIGQATRVKLTDVRLETRSVLGNIIK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaacaatccactgttagctcagctaaaacaacaaattgaagcaaataaagaa
tatgttgagggtaaagtaaaggcctcagataaaaattttggctttttagaagctgataaa
aaaagctactttattccaccgcttgaaatgaaaaaagtgatgcatggagataatgtcaaa
gcggttataaaacgagaaggcgataaggaatcggtcgaaatagatagcttaattgatcct
atgttagatcgttttattgcacgagttcgttttaataaagatggtaagctacaattagca
gttgaccatccacaaatcagattaaatattcccgcgactacgcataaaaaagtaacagaa
caattagcaaatgacgactgggtggtcgcacaattaaaaagccatccattacgagatgat
cgttttttctttgcacaagtcactgaatttatctgtaaagcggatgatcattttgcgcct
tggtgggttacacttgctcgccatcaacaaccacgtgaatcagtaaaaactgaacaatcc
tatactttacaagatcaatcacctcgtgaagatttatcgcatttatattttaccaccatc
gatagcccatctacgcaagatatggacgatgcattattcattgagccgatcactgaaaat
gctatccaacaaggctggcgtttagtggttgcaattgcagatcccactgcctatattgcc
gaagactcaaacattgaacacgcagcccgccaacgttgtttcacaaactacttaccaggg
ttcaacattcctatgttgccacgtgagctttctgatgatctttgttccctcgtaccaaac
aaaaaacgccctgcgttagttgtttatattgaaaccgatcttaacggcaatctaatcaaa
gacgctagtttccataccgcttgggtagaatcgaaagcaaaattagcatatgacaatgtt
tctgactatttagaaggcgtagagcaagcgtggcaacctgactgtgctgaactaaaacaa
caaatctattggctacaccaatttacacaagctcgcattcaatggcgatcaaaaaatgct
ttattgtttaaagaacaaatggattataactttgagttaaatgcagatggttccgtcaaa
agcattcagattcaatatcatcgcattgctaaccaaattattgaagaagcgatgattatt
gctaatatttgctgtgcacaattcttagctaaacatgccaaaacaggtatctttaacagt
catgcaggttttgatcctaaaaattatgaagcggtacaaacattcttactcaatacttta
gcaactgatgaaaatcgttctgagttaacagatctctttagcccaacacaattagcaaca
ctcgatggctattgtgcaatgcgacgttatattgaagattttccggaaaaattcctcgaa
ttacgtttacgccgttacttgacgtttgctgaatttaaggctgaagtcgcccctcatttt
ggtctaggtattagccattatgccacttggacttcacctatccgtaaatatggtgatata
gtcaaccaccgtttaatcaaacaagtattactaaatcagccaattaagcacatagagagt
acaattttagcccgcttacaagaagcacgccgccaaaatcgtttagtcgaacgcgatatc
gcagattggttatatgcacgctatttgctcccaatcgcaacacaaggggtagaatttgac
tgcgaaattaccgatatttcacgtggtggtattcgtgctaaagtactagaaaatggcgca
caaattttcattccttgttcaacattacacgaaaataaagatgaaattgattttatccct
gaagaaattgcactttacactaaaggggaaaaaatttatcaaatagggcaagctacccgt
gtaaaactaaccgatgtgcggttagaaacacgttcggtgttaggtaatattattaaatag
DBGET
integrated database retrieval system
