KEGG   Haemophilus ducreyi: HD_1286
Entry
HD_1286           CDS       T00135                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
hdu  Haemophilus ducreyi
Pathway
hdu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hdu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HD_1286 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hdu03400]
    HD_1286 (uvrA)
DNA repair and recombination proteins [BR:hdu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HD_1286 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HD_1286 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 RsgA_GTPase nSTAND3 AAA_23 AAA_25 AAA_21 DnaJ_CXXCXGXG NACHT cobW Viral_helicase1 COG3_N
Other DBs
NCBI-ProteinID: AAP96108
UniProt: Q7VLW2
LinkDB
Position
1046994..1049822
AA seq 942 aa
MKSIDIRGARTHNLKNINLILPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PKHDLPLVAQTISQMVDRVMQEPEGKRLMLLAPVVRNRKGEHVKLLENLTASGYIRARIN
GEICDLSDPPVLELQKKHTIEVVVDRFKVRSDMMSRLAESFETALELSGSTAIIADMDDP
GAPEMVFSASFACSECGYSLPELEPRLFSFNNPAGACPTCDGLGVEQYFDPAKVVQNPDV
SLASGAIKGWDRRSLYYFSLLTAVASYYAFDIDTPFAQLPAKIQQIILYGSSDEIEFFYI
NDRDDKIQRKHTFEGVLNNMARRYKETESNAVRDELAKYINNRACLACQGSRLRQEARNV
FIEQANLPEIAEKSIGEALTFFEQLELNGQRAQIAEKILKEIRERLQFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRDLGNTV
IVVEHDEDAIRAADHIVDIGPGAGVHGGQVIAQGSATEIMQIEASITGQYLAGKQKIEIP
TERIPYDANKLLILSGASGNNLKHVELVIPVGLFTCITGVSGSGKSTLINDTLFPLAQNA
LNRAERTDVAPYQAIDGLAHFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYNVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEVRYK
GKTIHQVLEMTVEEAREFFDAIPAIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLA
TELSKRDTGKTLYILDEPTTGLHFADIKQLLAVLHKLRDQGNTIVVIEHNLDVIKTADWI
VDLGPEGGAGGGQIIAQGTPEDVAQQPGSHTARFLTQILAKG
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgaaatctatcgacattcgtggtgcaagaacccacaaccttaagaatatcaatttaatt
ctaccaagagataaattaattgtaattaccggcttatcaggttctggtaagtcttcttta
gcctttgatactctctatgcggaagggcaacgtcgttatgtcgaatcactttcagcttat
gcacggcagtttctatcattaatggaaaagcccgatgttgatcatattgaaggtttatcg
ccggcgatttcgattgaacagaaatcaacgtcacataatccacgctcaaccgttggcact
attactgaaattcacgattatttgcgtttgttgtttgctcgagtaggtgaaccgcgttgt
ccaaaacacgatttgccattagtcgctcaaaccatttcgcaaatggttgatcgagtgatg
caagagcctgaaggcaaacgcttaatgttattagctccggttgtgcgtaaccgtaaaggc
gaacatgttaaattattagaaaatttgaccgcttcaggttatatccgtgccagaattaat
ggtgaaatttgtgatttatccgatcctcccgtgcttgaattacagaaaaaacacactatt
gaggtggtagtagatcgttttaaagtacgatcggatatgatgagtcgtttggcggagtcg
tttgagactgcattagaattatcgggatctacggcgattatcgctgatatggacgacccc
ggcgcgccagaaatggtcttttctgccagttttgcttgctctgaatgtggctattcatta
cctgaattagaacctcgtctgttttcctttaataatcctgccggtgcttgtccaacttgt
gatggtttaggcgtcgaacaatattttgaccctgctaaagtagtacagaacccagatgtt
tctttagcaagcggtgcaattaaaggttgggatcgccgtagtttatactactttagtcta
ttaaccgcagtggctagctattatgcctttgatattgatacgccatttgcgcaattgcca
gctaaaatccagcaaattattttatatggatcaagcgatgagattgagtttttttatatc
aatgatcgtgacgacaaaatacaacgcaaacatacctttgaaggtgtgttaaacaatatg
gcaagacgctataaagaaaccgaatcgaatgccgtgcgagatgaattagccaaatatatc
aataatcgtgcttgtttggcttgccaaggttcacgtttacgccaagaagcgcgtaatgtg
tttatcgaacaagccaatttacctgagatagccgaaaaatcgattggtgaagcattaact
ttttttgaacagctagaattaaatggccaacgagcccaaatcgctgaaaaaattctaaaa
gaaattcgtgaacgattgcaatttttggtgaatgttggcttaaattatctatcgttatcc
cgttcagcagagacgttatccggcggtgaagcacaacgaatacgcttggcaagtcaaatt
ggtgcaggcttagtgggggtcatgtatgtgttagatgaaccttcaattggtttacatcaa
cgcgataatgaacggctactcaatacgctgattcatttacgtgatttaggcaataccgtg
attgtagtagaacacgatgaagacgctatccgtgcagctgatcatattgttgatattggt
ccaggcgcaggggtacacggtggtcaagttattgcacaaggctcagctactgaaattatg
cagatcgaagcctctattaccggtcaatatttagccggcaaacagaaaattgagattcca
actgaacgaataccttatgatgccaacaaattactgattttaagcggagcaagcggtaat
aatttaaaacacgttgagttagtgattcctgttggtttatttacttgtattaccggtgta
tctggttcaggcaaatcaaccctcattaatgatactttgttcccattggcacagaatgcg
ttaaatcgtgcggaaagaacagatgttgcgccttatcaagcgattgatggcttagctcat
tttgataaagtgattgatattgatcaaagcccgattggtcggacaccgcgttctaaccct
gcgacttacaccggtttgtttacgccaattcgtgaattattcgccggtactcaagaagca
cgcgcacgaggttataacgttggacgttttagttttaatgtgcgaggcgggcgatgtgag
gcttgtcaaggtgatggtgtaattaaagtagaaatgcactttttaccggatgtgtatgtg
ccttgcgatcattgtaaaggcaaacgctataaccgtgaaacgttggaagttcgttataaa
ggcaaaacgattcaccaagtattagaaatgactgtcgaagaagcgcgtgagttttttgac
gctattccagcgattgcacgtaagttgcaaacgttaattgacgtaggattatcgtatatc
cgcttaggtcaatcatcaaccactttgtcggggggcgaagcacagcgggttaaattagct
actgaattatccaaacgcgataccggtaaaacgctctatattttagatgaaccgaccaca
ggattacattttgccgatattaagcaattattagccgtattgcataaattacgcgatcaa
ggcaataccattgtcgtgattgaacataatttagatgtgattaaaacggcggattggatc
gttgatcttggcccggaagggggggcaggaggcgggcaaattattgcacaaggtacgcct
gaagacgtggctcaacaaccaggctctcacaccgcgcgatttttaacacaaatattggcg
aaaggttaa

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