Haemophilus ducreyi: HD_1416
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Entry
HD_1416 CDS
T00135
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HD_1416 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_1416 (uvrB)
DNA repair and recombination proteins [BR:
hdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HD_1416 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HD_1416 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
EAD9
DUF87
Motif
Other DBs
NCBI-ProteinID:
AAP96222
UniProt:
Q7VLL3
LinkDB
All DBs
Position
1159958..1161985
Genome browser
AA seq
675 aa
AA seq
DB search
MSKPGKPFILNSPFAPSGDQPSAIKKLTEGLQDGLAHQTLLGVTGSGKTFTIANVIAQLN
RPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPASDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVNAYMQMMLHLQVGAIINQRDILARLA
ELQYTRNDQAFQRSTFRVRGEVIDIFPAESDEIALRIELFDDEIDNLSLFDPLTGHSFGK
IPRYTIYPKTHYVTPRERILTAIDQIKNELTGRQDYFIKEHKLLEEQRITQRTQFDIEMI
NELGYCSGIENYSRYLSGRQEGEPPPTLFDYMPADGLLIIDESHVTVPQIGGMYRGDRAR
KETLVQYGFRLPSALDNRPLKFEEFERLSPQTIYVSATPGNYELEKSNGDIIDQVVRPTG
LLDPIIEVRPVASQVDDVLSEIQQRVALDERVLITTLTKKMAEDLTDYLDEHGVRVRYLH
SDIDTVERVEIIHDLRIGMFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSESSLIQ
TIGRAARNLNGKAILYADRITHSMQKAITETERRREKQQKYNQEHNIIPQALNKKVRELL
DIGQTDKQKKGKQAVKIAEQSASYTPNAPKSRQALEKELKQLTQQMQKLAKDLEFEKAAA
VRDKIGQLKMALLEV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccaggtaaaccttttattctaaatagcccttttgcaccttcaggtgatcag
ccgtcggcgattaaaaaattaactgaaggtttgcaagatggcttagcacatcaaacatta
cttggcgtaaccggatcaggcaaaacctttactattgctaatgtaattgcacaacttaac
cgacccgcaatgttacttgcacctaataaaacgctagctgcacaattatatgctgaaatg
aaagccttttttcccgaaaatgcagtggaatattttgtttcttattatgattattatcag
ccagaagcgtatgtgccggcgagtgatacttttattgaaaaagatgcttcgattaatgaa
caaattgaacagatgcgattatcggcaactaagtcttttcttgaacgtcgcgatactatt
gtcgttgcatctgtttctgctatttatggcttaggtgatgtaaatgcatatatgcaaatg
atgttgcatttacaagttggagccattattaatcaacgcgacattcttgctcggctagca
gaactacaatatacccgcaatgatcaagcctttcagcgttcaacttttcgtgtccgaggc
gaagtgattgatattttcccagcagaatctgatgaaattgcattacgaatagaattattt
gatgatgaaattgacaatttatccttgtttgatccgctaaccggtcatagttttggtaag
atcccacgttatacgatttaccctaaaacacactatgtcacgcctagggaacgtattttg
accgccattgatcagatcaaaaatgaattaacgggtcgtcaagattatttcattaaagaa
cataaattgttggaagaacagcgcattacacaacgcacacaattcgatattgagatgatt
aatgaactaggttactgttcaggcattgaaaattattcgcgctatttatctgggcgtcag
gagggtgaaccaccaccaacattatttgattatatgcccgcagatggtttattaattatt
gacgaaagccatgtaaccgtgccacaaattggtggtatgtatcgcggggatcgggcaagg
aaagaaacattagtacaatatggttttcgcttaccgtcggcattagataatcgaccgctt
aaatttgaagaatttgaacgattatctccgcaaaccatttatgtttcagcaacaccgggc
aattatgaattagaaaaatcgaatggagacattattgatcaagtagtgcgcccaacaggt
ctgttagatccgataattgaagtacggccggtggctagccaagtagatgatgtgttatct
gaaattcagcaacgcgtagcgttagatgagcgagtattgattactacattaactaaaaaa
atggcggaagatttgaccgattatctagatgagcatggtgttcgagttcgttatttacac
agtgatattgatacggttgagcgggtcgaaattattcacgatcttcggataggtatgttt
gatgtgttagtgggtatcaacttattacgtgagggattggatatgccagaagttgctttg
gtggcaattcttgatgcggataaggaaggctttttacgctctgagagttcacttattcaa
acgattgggcgcgctgcacgtaatttaaatggtaaagccattctttatgcggatcgaata
acccattctatgcaaaaagcgatcactgaaacagaacgtcgccgagagaaacagcaaaaa
tataatcaagagcataatatcattcctcaagcattaaataaaaaagttcgtgaattacta
gatattggacaaacagataaacagaaaaaaggcaaacaagcggtaaaaattgccgaacaa
tctgccagttatactcctaatgcgcctaaatcacggcaggctctagaaaaagaattaaaa
caattaacacaacaaatgcaaaaattggctaaagatcttgaatttgaaaaagcggcggca
gtaagagataaaatagggcagttgaagatggctttattagaagtttaa
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