Haemophilus ducreyi: HD_1459
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Entry
HD_1459 CDS
T00135
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hdu
Haemophilus ducreyi
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdu03016
]
HD_1459 (truB)
Enzymes [BR:
hdu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HD_1459 (truB)
Transfer RNA biogenesis [BR:
hdu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HD_1459 (truB)
Prokaryotic type
HD_1459 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AAP96263
UniProt:
P59878
LinkDB
All DBs
Position
complement(1194634..1195551)
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AA seq
305 aa
AA seq
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MARPKKKGRDIHGVFLLDKPQGMSSNEVLQKVKRFYQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYIVTAKLGERTDTSDAEGELVESREVSLTEKDILAILPQFTGDLL
QVPTMFSALKHQGKPLYEYARQSITIEREARPITIFELKFISYEAPYLTLEVHCSKGTYI
RTLIDDLGEKLGCGAHVAILRRLAVADYPADAMMNYASLQHLSETEALEVLDEYLLPVDT
AVRRFPKIKLTTMQTKAIGFGQRVKFDNLAQIYGMVRLYSEADLFLGIAEITADNVIRPN
RMVNL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctagacctaaaaagaaaggacgtgatattcacggtgtctttttgttagataagcca
cagggtatgtcttccaatgaagtgttgcaaaaagtaaaacgattttaccaagccaataaa
gcagggcatacaggtgcattagatccattagcaactggtatgttgcctatttgtttaggt
gaagcgaccaaattttcacaatttttacttgattcagataagcgttacattgttacggca
aaattaggcgagcgaacagatacttctgatgccgaaggcgagcttgttgaaagtcgggaa
gttagccttactgaaaaggatatcttggcaattttaccacaatttacgggtgatctttta
caagtgcccacgatgttttctgctttaaaacatcagggtaaaccattatatgagtatgct
cgtcaaagcattactattgagcgtgaagctcgcccaattactatttttgaattgaagttt
attagttatgaagcaccttatttaacattagaagtacattgttcaaaaggtacttatatt
cgaactttaattgatgatttgggagagaaattaggctgtggtgcacacgtggcaatatta
cgacgattagccgtagctgattatcccgctgatgcaatgatgaattatgcaagtttgcaa
catttatcagaaacagaagcgcttgaagtattagatgaataccttttacctgttgatacc
gccgtgagaagatttcctaaaattaagctaaccactatgcaaacaaaagcgattggtttt
ggacaacgcgtaaaatttgataatttggcacaaatttatggtatggtgcgtttgtattca
gaagcggatctttttcttggtatcgcagaaataacggcagataatgttattcggcctaat
cgaatggtaaacctttaa
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