Haemophilus ducreyi: HD_1588
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Entry
HD_1588 CDS
T00135
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HD_1588 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdu03019
]
HD_1588 (pnp)
03016 Transfer RNA biogenesis [BR:
hdu03016
]
HD_1588 (pnp)
Enzymes [BR:
hdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HD_1588 (pnp)
Messenger RNA biogenesis [BR:
hdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HD_1588 (pnp)
Transfer RNA biogenesis [BR:
hdu03016
]
Prokaryotic type
tRNA degradation factors
HD_1588 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
S1_2
NTNH_C
KH_SLS1_2
KH_N4BP1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AAP96368
UniProt:
Q7VL91
LinkDB
All DBs
Position
1308506..1310644
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AA seq
712 aa
AA seq
DB search
MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVSVVAKKEVKEGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSENETLIARLIDRPIRPLFPEGFFNEIQIVATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQFVLNPTITEQKQSRLDLVVAG
TDKAVLMVESEADILSEEQMLAAVVFGHQQQQIVIENIKEFVKEAGKPRWDWQPAEANTA
LINQVKALAETRIGDAYRITEKQARYEQIDAIKADVIAQLTAQDETISEGAIIDIITALE
SSVVRGRILAGEPRIDGRTVDTVRALNICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGEKSDRFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVLAVMPSAEEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKATVAGIAMGLVKEDEKFVVLSDI
LGDEDHLGDMDFKVAGTRKGITALQMDIKIEGITPEIMHIALNQAKGARMHILNVMEQAL
PAPRADLSDFAPRIHTMKIDPKKIKDVIGKGGAVIRSLTEETGTSIDIDDDGTVKIAATD
NNAAKMVMSRIEEIVAEVEVNAIYTGKVSRVVDFGAFVTILGGKEGLVHISQITDARVER
VSDYLSVGQEVNVKVVEIDRQNRIRLTMKDLDNNLSTNVTPEAVVQEESTEN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacacccattgttaaacaatttaaatacggccaacataccgtaactctagaaacaggc
gctatcgcgcgtcaagccactgctgcggttatggcaagtatggacgatacgacagtcttt
gtaagtgtggtagcgaaaaaagaagtaaaagaaggtcaagacttcttcccattaacagta
aactatcaagaacgtacttatgcagctggccgtattcccggtggttttttcaaacgtgaa
ggacgcccgtccgaaaatgaaacgttaattgcacggctaatcgaccgcccaattcgtccg
cttttcccagaaggcttctttaatgaaattcaaattgttgctactgttgtttctgttaat
ccacaaattagcccggatttagtcgcaatgatcggcgcttctgcagcattatcactgtct
ggtgtaccatttaatggcccaattggtgcagcacgtgtcggctttattaatgatcaattt
gtccttaatccaacgattactgagcaaaaacaaagccgtttagatttagtggttgcaggt
acagataaagcggtcttaatggtcgaatctgaagcagatatcctttcagaagaacaaatg
ttagcggcggtggtatttggtcatcagcaacaacaaatagtgattgaaaatatcaaagaa
tttgtaaaagaagcgggaaaaccacgttgggattggcaaccagcagaagcaaatactgca
ttaattaatcaagtaaaagcattggcagaaacgcgtattggtgatgcctaccgcattaca
gaaaaacaagcacgttatgagcaaattgatgcgattaaagctgacgttatcgcacaatta
accgctcaagatgaaacaattagcgaaggtgctattattgatattatcaccgcattagaa
agttcggtcgtgcgtgggcgtatcttagcgggtgagcctcgtattgatggtcgtacagtg
gacacggttcgtgcattaaatatttgcaccggcgtattacctcgcacccatggttcggca
attttcacgcgtggtgaaactcaggcattagcagtcgctactttagggactgagcgtgat
gcacaaattattgatgaattaactggcgaaaaatccgaccgcttcttattccattataat
ttccctccatattctgtcggagagacaggtatgatcggctcaccaaaacgtcgcgaaatt
ggtcacggtcgtttagcaaaacgtggggtattagccgttatgccaagcgcagaagaattt
ccttatgtcgtacgtgttgtatcagaaattactgaatcaaatggttcttcctcaatggct
tccgtatgtggtgcgtctttagcgttaatggatgcaggtgtgccaattaaagctactgta
gcgggtattgctatgggattagttaaagaagacgaaaaatttgttgtgctttctgatatt
ttgggcgatgaagatcacttaggcgatatggactttaaagtagccggtacgcgcaaaggt
ataactgcactacaaatggatatcaaaattgaaggcattacgccagagattatgcatatt
gcattaaaccaagctaaaggtgcacgtatgcatattctgaacgtaatggaacaagcactc
cctgctccgcgtgcggatctttctgattttgcacctcgtattcacactatgaagattgat
cctaaaaaaatcaaagatgtgattggtaaaggcggtgccgttattcgttctttaactgaa
gaaaccggtacatccatcgatattgatgatgacggtacagtaaaaattgcagcaacagat
aataatgcggctaaaatggttatgtctcgtattgaagagatcgtagctgaagtagaagtg
aatgcaatttataccggtaaagtttcccgtgttgtcgattttggcgcattcgtgacgatt
ttaggtggcaaagaaggtttagtgcatatttcacaaattacagatgctcgtgttgaacgc
gtttctgattacctatcggtcggtcaagaagttaatgtaaaagtagtcgaaattgaccgc
caaaaccgtatccgcctaacgatgaaagatctggataataacctttcgacaaacgttact
ccggaagctgtcgttcaagaagaatctactgagaactaa
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