Haemophilus ducreyi: HD_1718
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Entry
HD_1718 CDS
T00135
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HD_1718 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_1718 (xthA)
Enzymes [BR:
hdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HD_1718 (xthA)
DNA repair and recombination proteins [BR:
hdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HD_1718 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AAP96478
UniProt:
G1UB84
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All DBs
Position
1432567..1433370
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AA seq
267 aa
AA seq
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MKFISFNINGLRARPHQLEAIINKHQPDVIGLQEIKVADEDFPHQLVEHLGYHVFYHGQK
GHYGVALLTKKQPLTIRKGFPNDTADAQKRMIMAEINTDFGILTVLNGYFPQGENRQHET
KFPAKAKFYADLQHYLETALTAYNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFL
PEEREWLDRLYHYGLVDTFRAMHPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANH
CVETGIDLEIRAMEKPSDHAPIWAVFK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatctcttttaatatcaatggcttacgtgctagaccacatcaattagaagca
atcatcaataaacatcagcctgatgtgatcggcttacaagaaatcaaagttgcagatgaa
gatttcccacatcaacttgtagaacatctgggctatcacgttttttatcatggccaaaaa
ggccattatggcgtagcacttttaactaaaaaacaaccgcttaccattcgtaaaggcttt
ccaaatgatacagctgatgcccaaaagcgaatgattatggcagagattaacactgatttt
ggtatcctaaccgtactaaatggctacttcccacaaggtgaaaatcgccagcatgaaaca
aaatttcctgctaaagcaaaattctatgctgacctacaacattatttagaaaccgcccta
acagcatacaaccctattattattatgggtgatatgaatatctgctctacggatttagat
attgggattggtgaagcaaatcgtaaacgttggctaagagaaggcaaatgttctttctta
ccagaagaacgcgaatggttagaccgtttatatcactatggtttagtagatactttccgt
gcaatgcatccaactacaactgatcaattctcatggtttgattatcgctctaaaggtttt
aatgacaaccgtgggttacgaattgacttaattttagcttcaacaacactagcaaaccat
tgtgtagaaacaggaattgatttagaaatcagagctatggaaaaaccctctgatcatgcc
cctatttgggcagtatttaaataa
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