Haemophilus ducreyi: HD_1765
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Entry
HD_1765 CDS
T00135
Symbol
rumA
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hdu
Haemophilus ducreyi
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdu03009
]
HD_1765 (rumA)
Enzymes [BR:
hdu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HD_1765 (rumA)
Ribosome biogenesis [BR:
hdu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HD_1765 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
PCMT
Cons_hypoth95
Methyltransf_11
MTS
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
Ubie_methyltran
DOT1
Methyltransf_4
Methyltransf_23
DUF7377
Motif
Other DBs
NCBI-ProteinID:
AAP96519
UniProt:
Q7VKU9
LinkDB
All DBs
Position
1476563..1477891
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AA seq
442 aa
AA seq
DB search
MAIFYSEKTAKQTAKNCCKTTARQIVNIHSLDYQGLDVAKINGKTWFIENALPNEQVLIH
VIEEKRQYGRAKANKILQASPLRQQPSCISYPQCGGCQMQHIKLDVQRQTKQQAFFKQLQ
RLQTEPIDWQPMISGQDKHYRRRTKLSMAIQRNQLVIGFRQQNTHQIIPLTDCEVLEQPL
STLLPKLQHLFAGWKMKKALGHIELVNADNTRAMLVLHIGKINAQDQHMLLNFAKAEQLS
LYLMCDENHIEHLCGEAPYYQINGLTLHFCIRDFIQVNQPLNQKMVNKALEWLAITAEDR
ILDLFCGIGNFSLPIAQQAGFVVGVEGVEEMVKQAKINQQTSGLNNIAFYQTNLAESFVD
QHWATQPFNKVLLDPARQGALFCLDHLMALTPERIIYISCNPATLMRDAEKLIRHGYKIA
KSAVIDMFPHTGHLESISMFIK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttttactctgagaaaacagcaaaacagactgccaaaaactgttgcaaaacg
accgctagacaaattgttaatatccactcactggattaccaaggattagatgtagctaaa
attaatggcaaaacgtggtttatcgaaaacgctttgcctaatgaacaagtgttaattcac
gtgattgaagaaaaacgccaatatggtagagcaaaagccaacaaaatattacaggcttcg
ccacttcgtcagcaaccgagttgtatcagctacccacaatgtgggggctgccaaatgcaa
catattaagcttgatgtacaacgccaaaccaaacaacaggcattctttaagcaattacaa
cgtttgcaaacagagccgattgattggcaacctatgattagtggtcaagataaacattat
cgtcgccgaacaaaattaagtatggcaatacaacgtaatcaattagtgattgggtttcgt
cagcaaaatactcatcaaattattccgcttactgactgtgaagtactagaacaaccgctt
tctacattactgcccaaactacaacacttatttgctggctggaaaatgaaaaaagcatta
ggccatattgaactagttaacgctgataatacgcgagcgatgttggttctccatatagga
aaaataaatgctcaagatcagcacatgttgctcaattttgcaaaagcagaacagctttcg
ctttatttaatgtgtgatgagaatcacattgaacatctttgcggtgaagcaccttattac
caaattaacgggctaacattacatttttgcattcgtgattttattcaagttaatcagccg
ttaaatcaaaaaatggttaataaagcgttagaatggctagcaattacagcagaagatcgc
attcttgatttattctgtggcataggcaatttcagtctaccgattgcacaacaagcgggt
ttcgtagttggagtagaaggtgtagaggaaatggtcaagcaagccaaaataaatcagcaa
actagcgggttaaacaatatagcattttaccaaactaatttagcagaatcttttgttgat
caacattgggctacacaaccttttaataaagtattactcgatcccgctcgtcaaggtgcc
ttgttttgtttagatcatttaatggcattaacaccagagcgaattatttatatttcgtgt
aatccagcgactttaatgcgtgacgctgaaaaactcattaggcatggctataaaatagca
aaatcagcagtgattgatatgtttccacatacggggcatttagaatccatttcaatgttt
ataaaatag
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