Haemophilus ducreyi: HD_1951
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Entry
HD_1951 CDS
T00135
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hdu
Haemophilus ducreyi
Pathway
hdu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hdu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HD_1951 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdu03021
]
HD_1951 (rpoA)
03400 DNA repair and recombination proteins [BR:
hdu03400
]
HD_1951 (rpoA)
Enzymes [BR:
hdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HD_1951 (rpoA)
Transcription machinery [BR:
hdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HD_1951 (rpoA)
DNA repair and recombination proteins [BR:
hdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HD_1951 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
AAP96671
UniProt:
Q7VKF8
LinkDB
All DBs
Position
complement(1637144..1638133)
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AA seq
329 aa
AA seq
DB search
MQGSVIEFLKPHLVNIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVAEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVSGKNDVTLTLNKSGIGPVLAADITHDGD
VEIINPNHVICHLTDKDASINMRIYVQRGRGYVPASARVHSQDEDRPIGRLLVDARFSPV
DRIAYNVEAARVEQRTDLDKLIIDMETNGTIDPEEAIRRAATILAEQLDAFVDLRDVRQP
EIKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgatagaatttttaaagccgcacttagtgaatattgagcaaattagt
tcaactcacgcaaaagtgaccttagagccgttagaacgtggttttggtcatacattaggt
aacgcacttcgtcgcattttactttcgtctatgcctggctgtgcagttgcagaagttgaa
attgatggtgtattacatgaatacagcagcaaagaaggcgtacaagaagatattcttgaa
gtattgttaaaccttaaaggtctagcggtaaaagtatcaggtaaaaatgatgttactctg
acacttaataagtctggaattggccctgtacttgcagccgacattacgcacgatggtgat
gtggaaattataaatccgaatcatgttatttgtcatttgacagataaagatgcatcaatc
aatatgcgtatctacgttcaacgtggtcgtggttatgtaccagcatcggctcgagtacat
tcacaggatgaagaccgtccaattggtcgcttattagttgatgctcgtttcagtccagta
gatcgtatagcttataatgtagaagctgcacgtgttgaacaacgaacagacttagataag
ctgattattgatatggaaacaaatggcacaatcgatccagaagaagccattcgtcgtgct
gcaacgattttagcagaacaattagatgcattcgttgatttacgtgatgttcgtcaaccc
gaaatcaaagaagaaaaaccggaatttgatccaattttacttcgccctgtagatgattta
gagttgacagttcgttctgctaactgtttgaaagcagagacaattcattatatcggtgat
ttagtacaacgtactgaagttgagttattaaaaacgcctaatcttggtaagaaatcactt
actgagattaaggatgtccttgcttcgcgtggtttgtcactgggtatgcgccttgaaaat
tggcctccagcaagtattgctgaagattag
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