Herbiconiux sp. SALV-R1: HL652_01545
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Entry
HL652_01545 CDS
T06594
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hea
Herbiconiux sp. SALV-R1
Pathway
hea03420
Nucleotide excision repair
hea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HL652_01545
03430 Mismatch repair
HL652_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hea03400
]
HL652_01545
Enzymes [BR:
hea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HL652_01545
DNA repair and recombination proteins [BR:
hea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HL652_01545
MMR (mismatch excision repair)
Other MMR factors
HL652_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
PAC4
EcoR124_C
Motif
Other DBs
NCBI-ProteinID:
QJU52461
LinkDB
All DBs
Position
296875..299295
Genome browser
AA seq
806 aa
AA seq
DB search
MSDATDQTTRSSIPIILDGPAGPRDDGGDPLLDGLNPEQREAVEYRGPALLIVAGAGSGK
TRVLTHRIAGLIRSGEAWPSQILAITFTNKAAAEMRERVGHLLGQVAEGMWISTFHSACV
RILRREAENFGFTKSFTIYDSQDSRALIKRIIKDHQADTFGFTVSQVAAKISKLKNELSD
VESYARGANFSDPQEAKFVEMFGAYTRALREANAFDFDDLISQTVFLFRAFPQVAERYQR
RFRHILVDEYQDTNHAQYALIRELTRPPESNELTGLAAFGGGGASLTVVGDSDQSIYAFR
GADIRNIVEFERDFPGAQVVLLEQNYRSTQNILTAANSVISNNFDRKDKKLWTAVGDGEK
IVGFTGYSGHDEAQFVADEIAKLRDAGMPYNEIAVFYRTNSQTRALEEIFIRSALPYRVL
GGTKFYERAEIKDAMAYLTSVANPFDALALRRILNTPKRGIGPATETQLASFAEREQVSY
REAMRRASELGLGPKVTGAILQLAALLDEAAELVDPERDGGEATVSEVLTLLMEKSGYVT
SLRASRDPQDEARAENVEELVAVTKEFNRNNPDGTLLDFLTEVSLVAAVDDLDDSSGTVS
LMTLHTAKGLEYDAVFLTGIEEDLLPHRMSASEPGGPAEERRLFYVGITRARKRLYLSLA
MTRAQFGETAVAMPSRYLQEIPAELIDWIQSPGMATSRGGTEPRALNAQRGRGGSGGISR
WNTDSGYGIPPGPPRPKTEWANRVTGQVRDNGDLELAPGDRITHTDFGEGRVNQVTGEGA
KRVAHVHFDSAGPKKLLIKIAPIEKL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccaccgatcagaccaccaggagcagcatcccgatcatcctcgacgggccc
gccgggccgcgggatgacggaggtgacccgctgctcgacgggctgaaccccgagcagcgc
gaggccgtcgagtaccgcggccccgccctgctcatcgtcgcgggcgccggcagtggcaag
acgcgggtgctcacgcaccgcatcgccgggctgatcaggagcggcgaggcgtggcccagt
cagatcctcgccatcaccttcaccaacaaggccgcggccgagatgcgcgagcgcgtcggg
cacctgctcggccaggtggcggaggggatgtggatctcgacgttccactcggcgtgcgtg
cgcatcctgcgtcgcgaggccgagaacttcggcttcaccaagagcttcaccatctacgac
tcgcaagactcgcgggcgctcatcaagcgcatcatcaaagaccaccaggccgacaccttc
gggttcacggtgtcgcaggtggccgcgaagatctcgaagctcaagaacgagctctccgac
gtggagtcgtacgccaggggcgcgaacttctccgacccgcaggaggcgaagttcgtcgag
atgttcggtgcgtacacgcgcgctctgcgcgaggccaacgccttcgacttcgacgatctc
atcagccagaccgtgttcctgttccgggcgttcccgcaggtggcggagcgctatcagcga
cggttccggcacatcctcgtcgacgagtaccaagacaccaaccacgcgcagtacgcgctc
atccgtgagctcacccggccgccggagtcgaacgagctgaccgggctcgccgcgttcggc
ggcgggggtgcgtcgctcaccgtggtgggtgactccgaccagtcgatctacgccttccgc
ggcgccgacatccgcaacatcgtcgagttcgagcgcgacttccccggcgcgcaggtggtg
ctgctcgagcagaactaccggtcgacgcagaacatcctcaccgcggcgaactcggtcatc
tcgaacaacttcgaccgcaaagacaagaagctctggactgccgtgggcgacggcgagaag
atcgtgggcttcaccgggtactccgggcacgacgaggcgcagttcgtcgccgacgagatc
gcgaagctccgcgatgcgggaatgccctacaacgagatcgcggtgttctaccgcacgaac
tcgcagacgagagcgctcgaagagatcttcatccgttccgcgttgccctaccgggtgctg
ggcggcacgaagttctacgagcgcgccgagatcaaagacgcgatggcgtacctcacgagt
gtcgcgaatccgttcgacgcgctcgcgctacggcgcatcctgaacaccccgaagcgcggc
atcgggcccgccaccgagacccagctggcctccttcgccgagcgcgagcaggtgagctac
cgcgaggccatgcgtcgtgcgtctgagctcgggctcgggccgaaggtcacgggggcgatc
ctgcagctggcggcgctgctcgacgaagccgccgagctggtcgaccctgagcgcgacggg
ggagaggcgacggtgagcgaggtgctcacgctgctcatggagaagagcgggtacgtcacg
agcctgcgcgccagtcgcgacccgcaagacgaggcgcgggccgagaacgtcgaagagctc
gtggccgtgacgaaggagttcaaccgcaacaaccccgacggcacgctgctcgacttcctc
acagaggtgtcgctcgtcgcggccgtcgacgacctcgacgactccagcggcaccgtgtcg
ctcatgacgctgcacaccgcgaaggggctcgagtacgacgcggtgttcctcaccggcatc
gaagaagacctgctgccgcaccgcatgtcggcgagcgagccgggtgggccggccgaggag
cggcgactgttctatgtgggcatcacgcgggcccgcaagcggctgtacctgtcgctcgcc
atgacgcgggcgcagttcggtgagaccgcggtggcgatgccgagccggtacctgcaggag
attccggcggagctcatcgactggatccagtcgcccggcatggccacctcgcgtggcggc
accgagccgcgcgccctcaacgcccagcgcgggcggggtggttcgggcggcatctcgcgg
tggaacaccgacagcggctacggcatcccgcccggtccgccgcggccgaagaccgagtgg
gccaatcgggtcaccggccaggtgcgcgacaacggtgacctcgagctggctcccggcgac
cgcatcacgcacaccgacttcggcgagggccgagtgaaccaggtcaccggcgagggcgcc
aagcgtgtcgcccacgtgcacttcgactccgccggccccaagaaactcctcatcaagatc
gcccccatcgagaagctctga
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