Herbiconiux sp. SALV-R1: HL652_03835
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Entry
HL652_03835 CDS
T06594
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hea
Herbiconiux sp. SALV-R1
Pathway
hea02024
Quorum sensing
hea03060
Protein export
hea03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HL652_03835 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HL652_03835 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HL652_03835 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hea02044
]
HL652_03835 (ffh)
Enzymes [BR:
hea01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HL652_03835 (ffh)
Secretion system [BR:
hea02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HL652_03835 (ffh)
Eukaryotic Sec-SRP protein
HL652_03835 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_31
nSTAND3
cobW
AAA_22
ArsA_ATPase
Zeta_toxin
MMR_HSR1
AAA_24
AAA_30
APS_kinase
AAA_18
NACHT
AAA_16
AAA_33
AAA_25
NPHP3_N
TsaE
Mod_r
ParA
ABC_tran
MobB
Motif
Other DBs
NCBI-ProteinID:
QJU52851
UniProt:
A0A6M5IUE6
LinkDB
All DBs
Position
786265..787842
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AA seq
525 aa
AA seq
DB search
MATFGNLSDRLSETFKNLRTKGKLSPADVDSTVREIRRALLDADVALEVVKEFTGKVRER
ALGDEVNRALNPAQQVVQIVNEELVQILGGQQRRLEFAKRPPTIIMLAGLQGAGKTTLAG
KLAKWLAKDNHTPLLVAADLQRPNAVNQLQVVGGQAGVAVYAPEPGNGVGNPVKVAKDSI
KFAVDKQYDTVIIDTAGRLGVDADMMKQAADIRRATNPDEVLFVIDAMIGQDAVATARAF
QEGVDFTGVVLTKLDGDARGGAALSVASVTGRPIIFASTGETLDDFEAFHPDRMASRILD
LGDILSLIEQAQSAFDEEEARKVAEKFATDSFTLDDFLKQMQQLRNVGSIKKMMGMLPGA
GGLKQQLENFDEREIVRTEAIIQSMTPAERTNPKLLNGSRRLRIARGSGMTVTDVNSLVQ
RFEQAAKMMKTVAKGGVPNVPGMGPIPGAGFGGGRGKQQAKKKSGSRSGNPAKRAAENAA
RAAGEKPAVTAGTSGGAGFGLGSKGPNGSANPSPEELEALQRFLR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggctacttttggaaatctctcggacaggctctccgaaaccttcaagaacctccgcacg
aagggcaagctgagccccgccgacgtcgactcgactgtccgcgagatccgccgcgccctg
ctcgacgccgatgtcgcgctcgaggtcgtgaaggagttcaccggcaaggtgcgcgagcgc
gccctgggcgacgaggtgaaccgcgcgctgaaccccgcgcagcaggtcgtgcagatcgtc
aacgaggagctcgtgcagattctcggcggccagcagcgccggctcgagttcgccaagcgc
ccgccgaccatcatcatgctcgccggcctccagggtgccggtaagacgacgctcgcgggc
aagctcgcgaagtggctcgccaaagacaaccacaccccgctgctcgtggctgccgacctc
cagcgcccgaacgcggtgaaccagctgcaggtcgtgggcggccaggccggcgtcgcggtg
tacgcgcccgagcccggcaacggggtgggcaacccggtcaaggtggcgaaagactccatc
aagttcgcggtcgacaagcagtacgacacggtcatcatcgacaccgccggccgtctcggt
gtcgacgccgacatgatgaagcaggccgcagacatccgtcgtgcgacgaaccccgacgag
gtcctcttcgtcatcgacgccatgatcggtcaagacgccgtggccacggcccgcgccttc
caggagggcgtcgacttcaccggcgtcgtgctcacgaagctcgacggcgacgcccgcggt
ggcgccgcgctctcggtcgcgtcggtcaccggccgccccatcatcttcgcgtcgacgggt
gagaccctcgacgacttcgaggccttccaccccgaccgcatggcgtcgcgcatcctcgac
ctgggtgacatcctctcgctcatcgagcaggcgcagtcggcgttcgacgaagaggaggcg
cggaaggtcgccgagaagttcgcgaccgacagcttcacgctcgacgacttcctcaagcag
atgcagcagctgcgcaacgtcggctccatcaagaagatgatgggcatgctgccgggcgcc
ggaggtctcaagcagcagctggagaacttcgacgaacgcgagatcgtgcgcaccgaggcg
atcatccagtcgatgaccccggccgagcgcacgaaccccaagctcctgaacggctcgcgg
cgcctgcgcatcgcgcgcggctcgggcatgacggtcaccgacgtgaactcgctcgtgcag
cgcttcgagcaggcggcgaagatgatgaagacggtcgccaagggcggtgtgccgaacgtt
cccggcatgggccccatcccgggcgccggcttcggcggcggccgcggcaagcagcaggcg
aagaagaagagcggatcgcgctcgggcaacccggccaagcgtgcggcggagaacgcggcg
cgggccgcgggcgagaagcccgccgtcaccgcgggcaccagcgggggagcgggtttcggg
ctcggctcgaaggggccgaacggctcggcgaaccccagccccgaggagctcgaggcgctc
cagcggttcttgcgctga
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