Herbiconiux sp. SALV-R1: HL652_06955
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Entry
HL652_06955 CDS
T06594
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hea
Herbiconiux sp. SALV-R1
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hea03400
]
HL652_06955
Enzymes [BR:
hea01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HL652_06955
DNA repair and recombination proteins [BR:
hea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HL652_06955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QJU53392
UniProt:
A0A6M5IS81
LinkDB
All DBs
Position
complement(1433922..1435394)
Genome browser
AA seq
490 aa
AA seq
DB search
MTRTRWLFAGQLGPAFDDGGRMLIIEARSVFGRRPMHRAKAHLILSALRHRARELGDRVE
FHQVQRYAEVVDGRDDLEVIDPTSWAARRFVRRRGIEVLPSRGFVTSETDFAAWAERATS
GGKRLLLEDFYRTARERTGILMRGDQPEGGRWNYDADNRNPPPRGAARLGLPEPWWPRED
DIDDEVRADLDRWQRDGHVTLVGDDGPRRFAATRAEAEHALADFLESRLGDFGTFEDAML
GGDWTMAHSLLSAPLNLGLLDPLEVVDAAVAEYDAGRAPLAGVEGFTRQIIGWRDYVWHL
YWHLGEGYRTGTNALGAHTPLPPAFRELDPALVESNCLRETLDGMRRHGWAHHIQRLMVL
GNWALQHGYDPVALNDWFVDMFVDGTPWVMPANVIGMSQHADGGVVATKPYAAGGAYIDR
MSDYCSGCAFNPKVRLGENACPFTAGYWAFLDRVEPRIRGNHRMAQPLAGLRRLADREAV
VDQERHRERW
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtaccagatggctgttcgccgggcagctgggcccggcgttcgacgacggcggg
cggatgctcatcatcgaggcgcggtcggtgttcgggcgccggccgatgcaccgggcgaag
gcgcacctcatcctctcggctctccgccaccgtgcgcgcgagctcggcgaccgggtcgag
ttccaccaggtgcagcgctacgccgaggtggtcgacggccgcgacgacctcgaggtgatc
gatcccacctcgtgggcggcccgccgcttcgtgcgtcgacgcggcatcgaggtgctgccg
agccgcggcttcgtcacctccgagaccgacttcgccgcctgggccgagagggcgacgagc
ggcggtaagcggctgctgctcgaagacttttaccgcacggcgcgcgagcgcaccggcatc
ctcatgcgcggcgaccagcccgagggcggccgctggaactacgacgccgacaaccgcaac
ccgcccccgagaggcgccgcccggctcggccttcccgaaccctggtggccgcgcgaagac
gacatcgacgacgaggtgcgcgccgacctcgaccgctggcagcgcgacggccacgtgacc
ctcgtcggcgacgacggcccgcggcgtttcgccgccacccgcgccgaggccgagcacgcc
ctcgccgacttcctcgagtcgcgcctcggcgacttcggcaccttcgaagacgccatgctc
ggaggcgactggacgatggcgcactccctgctcagcgctcccctcaacctcggcctcctc
gacccgctcgaggtcgtcgacgcggcggtcgccgagtacgacgccggccgcgccccgctc
gcgggcgtggagggcttcacccgccagatcatcgggtggcgcgactacgtctggcacctc
tactggcacctcggcgagggctaccgcacgggcaccaacgcgctcggcgcccacacccct
ctccctcccgcgttccgcgagctcgacccggccctcgtcgagtcgaactgcctgcgcgag
acactcgacggcatgcgtcggcacggctgggcgcaccacatccagcgcctcatggtgctc
ggcaactgggcgctgcagcacggctacgacccggtggccctgaacgactggttcgtcgac
atgttcgtcgacggcaccccctgggtgatgcccgcgaacgtcatcggcatgtcgcagcac
gccgacgggggcgtcgtggccacgaagccctacgcggcaggcggcgcctacatcgaccgc
atgtcggactactgctccggatgcgcgttcaaccccaaggtgcgcctcggcgagaacgcc
tgccccttcaccgccgggtactgggcgttcctcgaccgggtggagccgcgcatccggggc
aaccatcgcatggcgcagccgctcgccggcctccgcagactcgccgatcgcgaggccgtg
gtcgaccaggagcggcaccgcgagcgctggtga
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