KEGG   Herbiconiux sp. SALV-R1: HL652_07745
Entry
HL652_07745       CDS       T06594                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hea  Herbiconiux sp. SALV-R1
Pathway
hea03030  DNA replication
hea03430  Mismatch repair
hea03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HL652_07745
   03430 Mismatch repair
    HL652_07745
   03440 Homologous recombination
    HL652_07745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hea03032]
    HL652_07745
   03400 DNA repair and recombination proteins [BR:hea03400]
    HL652_07745
Enzymes [BR:hea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HL652_07745
DNA replication proteins [BR:hea03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HL652_07745
DNA repair and recombination proteins [BR:hea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HL652_07745
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: QJU55990
UniProt: A0A6M5J5P2
LinkDB
Position
1594990..1595718
AA seq 242 aa
MPAWAERLVVFDLETTGIDVETSRVVTANVSRLDASGVVTRRRDWLADPGVEIPLQATAV
HGVATARARAEGRPAAEVVGEIVEELRAALEDGYALVIYNAPYDLTLLAREAVRHGVAPL
VGPFPVIDPLVIDKRVDRYRKGKRTLEVTASVYGVDLTDAHDAGADAIAAGRVAQALGLR
HGADLALTAAELHTAQIAWHDAQCDSFEDYMRTTRDPSFTARRGWPEVPAPVPAAVPVSA
DR
NT seq 729 nt   +upstreamnt  +downstreamnt
ctgccggcctgggccgagcggcttgtggtgttcgacctcgagaccaccggcatcgacgtc
gagacgagcagggtcgtcaccgcgaacgtgagccgcctcgacgcgagcggcgtcgtcacg
cgccggcgtgattggctggccgaccccggcgtcgagatcccgctgcaggccaccgccgtg
cacggtgtcgccaccgcccgcgcccgcgccgagggccgcccggccgccgaggtggtgggc
gagatcgtcgaagagctgcgcgccgcgctcgaagacggctacgcgctcgtcatctacaac
gcgccctacgacctcacgctgctcgcccgcgaggccgtgcgccacggcgtcgcgccgctc
gtcggcccgttccccgtcatcgacccgctggtcatcgacaagcgggtcgaccgctaccgc
aagggcaagcgcaccctcgaggtcaccgcctccgtctacggcgtcgacctcaccgacgcc
cacgacgccggagccgacgccatcgccgccggtcgcgtcgcccaggccctcgggctccgc
cacggcgccgacctcgccctcaccgccgccgagctccacaccgcccagatcgcctggcac
gacgcccagtgcgactccttcgaagactacatgcgcaccacccgcgacccctccttcacc
gcccgccggggctggcccgaggtccctgcgcccgtgcccgcggcggtccctgtgtcagct
gatcgctag

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