Herbiconiux sp. SALV-R1: HL652_08375
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Entry
HL652_08375 CDS
T06594
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hea
Herbiconiux sp. SALV-R1
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hea03016
]
HL652_08375
Enzymes [BR:
hea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HL652_08375
Transfer RNA biogenesis [BR:
hea03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HL652_08375
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QJU53645
UniProt:
A0A6M5IYT6
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All DBs
Position
1730409..1731638
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AA seq
409 aa
AA seq
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MSDVSKEPQNETPARTVIATVDDFHDAVEAIALGEGPVAVDAERASGFRYSQRAYLIQVF
RRGAGSFLFDPPAIEEFAPLQSVIGDVEWVLHAASQDLACLREVGLDPTTVFDTELAARL
LGLPRVGLGAVVEELLGIHLAKEHSAADWSTRPLPASWLEYAALDVELLVDLRDAMAELL
RQQGKEQVAAEEFAAVVAKEEKQPLAEPWRRLSGITSLRPDRHLAAARELWLARDDLARS
TDTAPGRLVPDASLLVAAKALPTSRRELASLKAFSGRASRTEIDRWWAAIERARTTDDIP
TQKRATDTLPPPRSWSDRNPEADARLKTARAALTAVSEEHSIPLENLLTPDFLRRVAWNP
PSPLTLETVSDALAELGARPWQIGLTAQPILDSFVEPHQPDETAPEAAS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgtgagcaaagaaccccagaacgagaccccggcccgcaccgtcatcgcgacg
gtcgacgacttccacgacgccgtcgaggcgatcgcgctcggcgagggcccggtggccgtc
gacgccgaacgggcgagcggcttccgctactcgcagcgcgcctacctcatccaggtgttc
cgccgcggggcgggcagcttcctgttcgacccgccggcgatcgaggagttcgctcccctg
cagtcggtgatcggcgacgtggagtgggtgctgcacgcggcgagccaagacctggcgtgc
ctgcgcgaggtcggcctcgaccccaccaccgtcttcgacaccgaactcgcggcacgactg
ctcgggctcccccgcgtcggcctcggcgccgtggtggaggagctgctcggcatccacctc
gccaaggagcactcggcggccgactggtcgaccaggccgctgcccgcctcctggctcgag
tacgccgcgctcgacgtcgagctgctggtcgacctgcgcgacgccatggccgagctgctg
aggcagcagggcaaggagcaggtcgccgccgaggagttcgccgccgtcgtcgccaaggag
gagaagcagccgctggccgagccctggcgccggctctcgggcatcacctcgctccgcccc
gaccgtcacctcgctgcggcccgcgagctgtggctcgcccgcgacgacctcgcccgctcg
accgacacggctccggggcggctcgtgcccgacgcctccctcctcgtcgccgccaaggcg
ctgcccacgtcgcgacgggagctggcgtcgctcaaggcgttctccgggcgggcgagccgc
accgagatcgaccgctggtgggcggccatcgagcgggctcgaacgaccgacgacatcccc
acccagaagcgcgccaccgatacgctgccgccgccgcgcagctggagcgaccgcaacccc
gaggcggatgcgcggctgaagaccgcgcgcgcagcgctcaccgcggtgagcgaggagcac
agcatcccgctcgagaacctgctcacccccgatttcctgcgccgcgtcgcgtggaacccg
ccctccccgctcacgctcgagacggtgtcggatgcgctggccgagctgggtgcgcgcccc
tggcagatagggctgaccgcacaaccgatcctcgactcctttgtcgagccccaccaaccc
gacgagacagcgcccgaggccgcatcgtag
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