Herbiconiux sp. SALV-R1: HL652_08450
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Entry
HL652_08450 CDS
T06594
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hea
Herbiconiux sp. SALV-R1
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hea03032
]
HL652_08450
03400 DNA repair and recombination proteins [BR:
hea03400
]
HL652_08450
Enzymes [BR:
hea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HL652_08450
DNA replication proteins [BR:
hea03032
]
Prokaryotic type
DNA Topoisomerases
HL652_08450
DNA repair and recombination proteins [BR:
hea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HL652_08450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6026
ABC_tran_CTD
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QJU53659
LinkDB
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Position
1750150..1752642
Genome browser
AA seq
830 aa
AA seq
DB search
MTQAKNDPSESAVEKILDVDVATEMQDSFLEYAYSVIYSRALPDARDGLKPVQRRILYMM
SEMGLRPDRGHVKSARVVGEVMGKLHPHGDTAIYDALVRLAQSWTMRVPLIDGHGNFGSP
DDGPAAPRYTEARLDSPAMTMVEGLDEDVVDFVPNYDNQLTQPDVLPAAIPNLLVNGASG
IAVGMATNMAPHNLIEVVAGARYLIENPDATLDELMTFIPGPDLPGGGTIVGLAGVRDAY
ETGRGAFKTRAKVSIETLTPRKTGLVVTELPYLVGPEKVIAKIKDGVTAKKIQGISDVTD
LTDRTNGLRLVIGIKTGFDPAAVLEQLYKLTPLEDGFNINNVALVDGGPLTLGLRDLLVV
YVNHRIDVVTRRTRYRLDRRRERLHLVEGLLIAILDIDEVIQVIRSSDDTEQARVRLIDV
FELSVLQADYILELRLRRLTKFSRIELEAERDQLQAEIAQLEALLGDPALIRKAVSDELD
EVAEKYGTPRRTLLTEARPALPAASRRAAPVLEVTDVPCVVYLSTTGRVVRVDREETEGG
AAVGAGSALGGPTAPVRRSKHDAIRSEVVTTRRSEIGAVTDTGRLVRMPVLDLPAVPASS
VQLGAGVKVGEYLALDTKREKVVALVSLDSPVPISLGTAQGVVKRVAPGGYPARPDFEII
ALKPGDSVVGAAQHSEDDELVFITSDAQLLRFFQASVRPQGAAAGGMAGINLAAGASVIW
FGSVPDGQDAVVVTIAGSTSTLAGTDAGSGKVSDFAEFPPKGRATGGVRAHRFLKGEDVL
TVAWAGPAPALAVANDGAARSLPEVGARRDASGAALSGVVGSIGSARSAS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagcgaagaacgatccctccgagagcgcggtcgagaagatcctcgacgtcgac
gtcgccaccgagatgcaggattcgttcctcgagtacgcgtactcggtcatctactcccgc
gccctccccgacgcgcgtgacggtctgaagccggtgcagcgccgcattctgtacatgatg
agcgagatgggcctgcgccccgaccgcgggcacgtcaagagcgcgcgcgtggtgggcgag
gtgatgggcaagctccacccgcacggcgacaccgccatctacgacgccctggtgcgcctg
gcccagtcgtggacgatgcgggttcccctcatcgacgggcatggcaacttcggctccccc
gacgacggaccggccgctccccgctacaccgaggccaggctcgactcccccgccatgacc
atggtggagggcctcgacgaagacgtcgtcgacttcgtgccgaactacgacaaccagctc
acccagcccgacgtgctgccggccgccatcccgaacctcctggtgaacggggcgagcggc
atcgccgtgggcatggcgaccaacatggcgccgcacaacctcatcgaggtcgtggcgggc
gcccgctacctcatcgagaaccccgacgcgacgctggatgagctgatgacgttcatcccc
ggtcccgacctcccgggtggtggcacgatcgtgggcctcgcgggcgtgcgcgacgcctac
gagaccggtcgaggggcgttcaagacccgggcgaaggtgtcgatcgagaccctcacgccg
cggaagacggggctcgtcgtcaccgagctgccctacctcgtggggcccgagaaggtgatc
gccaagatcaaggacggcgtcaccgccaagaagatccagggcatcagcgacgtcaccgac
ctcaccgaccgcacgaacggcctgcgcctggtgatcggcatcaagaccgggttcgacccg
gccgccgtgctcgagcagctctacaagctgaccccgctcgaagacggcttcaacatcaac
aacgtcgcgctggtcgacggcgggccgctcacgctcgggctccgcgatctgctcgtggtc
tacgtcaaccaccgcatcgacgtcgtgacccggcgcacccgctaccggctcgaccggcgc
cgcgagcggctgcacctcgtcgagggcctcctcatcgcgatcctcgacatcgacgaggtc
atccaggtcatccgctcgagtgacgacaccgagcaggcgcgcgtgcgactcatcgacgtg
ttcgagctgagcgtgctgcaggccgactacatcctcgagctgcggcttcgcaggctcacc
aagttctcgcgcatcgagctcgaggccgagcgcgaccagctgcaggctgagatcgcgcag
ctcgaagcgctgctcggcgacccggcgctcattcgcaaggccgtctccgacgagctcgac
gaggtcgccgagaagtacggcacgccgcgccgcacgctgctcaccgaggcacggcccgcg
cttcccgcggcgtcccgccgggctgcgccggtgctcgaggtcaccgacgtgccctgcgtc
gtgtacctcagcaccacggggcgcgtcgtgcgggtcgaccgcgaggagacggagggcggg
gccgctgtcggcgccggctcggcgctcggtgggccgaccgctccggtgcggcgcagcaag
cacgacgccatccgcagcgaggtggtgaccacccgtcgctccgagatcggggccgtcacc
gacaccgggcggctcgtgcgcatgccggtgctcgacctccccgccgtgccggcctcgtcg
gtgcagctcggcgcgggcgtgaaggtgggcgaatacctcgcgctcgacaccaagcgcgag
aaggtcgtggccctggtgtcgctcgactcccccgtgcccatctcgctcggcaccgcgcag
ggcgtggtgaagcgcgtggcccccggcggttaccccgcgcggcccgacttcgagatcatc
gcgctgaagccaggcgactccgtcgtgggggcggcgcagcactccgaagacgacgagctc
gtgttcatcacctcagacgcccagctgctgcggttcttccaggcgagtgtgcgcccgcag
ggagctgccgcgggaggaatggccggcatcaatctcgcggcaggagcatccgtcatctgg
ttcggctcggtgcccgacgggcaggatgcggtggtcgtcacgatcgcgggcagcacctcc
accctggccggcacggatgcggggagcggcaaggtctccgacttcgccgagttcccgccc
aagggccgggccaccggcggcgtgcgcgctcaccgcttcttgaagggcgaagacgtgctc
acggtggcctgggccggccctgcgcccgcactggccgtcgcgaacgacggcgccgcccgg
agcctccccgaggtgggggcccggcgcgatgcgtcgggagcggctctgagcggcgtcgtg
ggttcgatcggctccgcccgctccgcgagctga
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