Herbiconiux sp. SALV-R1: HL652_09285
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Entry
HL652_09285 CDS
T06594
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hea
Herbiconiux sp. SALV-R1
Pathway
hea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HL652_09285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hea03400
]
HL652_09285
Enzymes [BR:
hea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HL652_09285
DNA repair and recombination proteins [BR:
hea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HL652_09285
Prokaryotic type
HL652_09285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QJU53808
UniProt:
A0A6M5IZD8
LinkDB
All DBs
Position
complement(1925107..1925799)
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AA seq
230 aa
AA seq
DB search
MPALSLPELAAAGSIDPGWAEALEPVAPRIAALGDFLRAENGAGRGYLPAGPDVLRAFRA
PLADVRVLIVGQDPYPTPGHPIGLSFAVERHVRPLPRSLSNIYRELNDDLGIPPAEHGDL
SSWSENGVMLLNRVLTVRPGTPASHRGKGWEEVTEHAIRVLVARETPLVAILWGRDAAGL
VPMLSEVPHVSSAHPSPLSASRGFFGSKPFSRANALLAAQGAAEVDWRVR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcactctctctccccgaactcgccgccgccgggtcgatcgaccccggctgggcc
gaggccctcgagcccgtcgcgccgcgcatcgccgcgctcggcgacttcctccgcgccgag
aacggggcggggcggggctatctccccgcaggccccgacgtgctgagggccttccgtgcg
ccgctggccgacgtgcgggtgctcatcgtcgggcaagacccctatccgaccccggggcat
ccgatcggattgtcgttcgccgtcgagcgccacgtgcggccgctgccgcggagcctgtcg
aacatctaccgggagctgaacgacgacctcggcatcccgcccgccgagcacggcgacctc
tcgtcctggagcgagaacggcgtgatgctgctcaaccgcgtgctcaccgtgcgacccggc
acgccggcctcgcaccggggcaagggctgggaggaggtgaccgagcacgctatccgcgtg
ctcgtcgccagggagacgccgctcgtggcgattctgtgggggcgcgacgccgcggggctg
gtgccgatgctcagtgaggtgcctcacgtgtcgtcggcgcatccgagccccctgtcggcg
agccggggcttcttcgggtcgaagccgttcagccgcgcgaacgccctgctcgccgcccag
ggagccgcggaggtcgactggcgcgtgcggtag
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