Herbiconiux sp. SALV-R1: HL652_10715
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Entry
HL652_10715 CDS
T06594
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hea
Herbiconiux sp. SALV-R1
Pathway
hea03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HL652_10715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hea03019
]
HL652_10715
03009 Ribosome biogenesis [BR:
hea03009
]
HL652_10715
03036 Chromosome and associated proteins [BR:
hea03036
]
HL652_10715
Enzymes [BR:
hea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HL652_10715
Messenger RNA biogenesis [BR:
hea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HL652_10715
Ribosome biogenesis [BR:
hea03009
]
Eukaryotic type
90S particles
RNase
HL652_10715
Prokaryotic type
rRNA processing factors
HL652_10715
Chromosome and associated proteins [BR:
hea03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HL652_10715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Dicer_dimer
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QJU54044
LinkDB
All DBs
Position
complement(2238072..2238776)
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AA seq
234 aa
AA seq
DB search
MSSDTEGDRSHLLATLQVELSPELLDLALTHRSYAYEHGNVPTNERLEFLGDSILGQAVT
VMLYTTYTGLDEGELAKRRAALVSTVALAEIARTVGLGGYLKLGRGEELTGGRDKASILA
DTVEAIIGATYLDQGPDVATALVLRLVMPLADDPSRFGISMDPKTSLQERAAQRGYQAPV
YEMQESGPDHQKSFLATVTLRPAGKGHVVSATGNGSSKKHAEMAAAAAAFQQLG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggacaccgagggagaccggtcgcaccttttggcgaccctgcaggtcgagctc
tcgcccgagctgctcgacctggcgctcacccatcgctcctacgcgtacgagcacggcaac
gtgcccaccaacgagcggctcgagttcctcggcgactccatcctcggccaggccgtcacg
gtgatgctctacaccacctacacgggcctcgacgagggcgagctcgccaagcggcgtgcc
gcgctggtgagcacggtcgcgctcgccgagatcgcccgcaccgtcgggctcgggggctac
ctcaagctgggtcgcggcgaagagctcaccggcggccgcgacaaggcgtccatcctcgcc
gacaccgtcgaggcgatcatcggcgccacctatctcgaccagggcccggacgtcgccacc
gctctggtgctccggctcgtcatgcccctcgccgacgacccgagccgcttcggcatctcg
atggacccgaagacctccctgcaggagcgtgcagcgcagcgcggctaccaggcgcccgtc
tacgagatgcaggagtcggggcccgaccaccagaagagcttcctggcgaccgtgacgctc
cgcccggcggggaagggccacgtcgtgtcggccaccgggaacgggtcgagcaagaagcac
gccgagatggccgccgccgccgcggcgttccagcagctcggctga
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