Herbiconiux sp. SALV-R1: HL652_11210
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Entry
HL652_11210 CDS
T06594
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hea
Herbiconiux sp. SALV-R1
Pathway
hea02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HL652_11210
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HL652_11210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hea02000
]
HL652_11210
Transporters [BR:
hea02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HL652_11210
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
ADH_zinc_N
DUF7537
Motif
Other DBs
NCBI-ProteinID:
QJU54128
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Position
complement(2346812..2348011)
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AA seq
399 aa
AA seq
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MTRRITTTLRAAAVLGAFSLLAAGCSAGGDGGGATGAAGDAVPLTYMADDGSCASGPADG
IDFATADALVKTFEEPATEILATEPLKEPVDPNTKAVYLNNGTPIAALFQAGLQTASEAA
GIQFVNVDTGTDAQSINSALNSVVEMNPDIVFDQSVDARFFQDQLAQLEQQGAAIVYGGQ
LNADEFGLRDSLGGAGSIEVNSKVLANAAVSLTCGTATEFVMYSIPEIPASEIQNEAVPA
ALKELCPQCNIRTVDISIADPSPADKIVSDLQAHPETQFFISLADQYQIGLADKAQLAGL
TNAYGVGQSSLPQNIQQIADGTEVAGYVVDFNMFMWLQVDEGLRAMQGMEVPYLDGDWES
AARAVSHIVTIRNADQYLTPAGYVALPGFEDQFTTLWGK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgactcgacgcatcaccacgaccctcagggccgccgccgtgctcggcgccttctccctc
ctcgccgccggctgctcggccggcggtgacgggggcggcgccacaggagccgcaggcgac
gccgtgccgctcacctacatggccgacgacggctcgtgcgcatccggccccgccgacggc
atcgacttcgccaccgcagacgcgctggtgaagaccttcgaggagccggccaccgagatc
ctcgccaccgagcccctcaaggagccggtcgacccgaacaccaaggcggtctacctcaac
aacggcacccccatcgccgcgctgttccaggcgggcctccagacggcgtcggaggcggcg
ggcatccagttcgtcaacgtcgacaccggaacggatgcgcagagcatcaactcggccctc
aactcggttgtcgagatgaatcccgacatcgtgttcgaccagtcggtcgacgcgcgcttc
ttccaagaccagctggcccagctcgagcagcagggcgccgcgatcgtctacggcgggcag
ctgaacgccgacgagttcgggctccgcgactcgctcggcggtgcgggcagcatcgaggtg
aacagcaaggtgctggcgaacgccgccgtctcgctcacctgcggcaccgcgacggagttc
gtcatgtactccatccccgagatcccggcctccgagatccagaacgaggcggttcccgct
gcgctgaaggagctctgcccccagtgcaacatccgcacggtcgacatctcgatcgccgac
cccagcccggccgacaagatcgtcagcgacctgcaggcgcatccggagacgcagttcttc
atctcgctcgccgaccagtaccagatcgggctcgccgacaaggcgcagctcgcggggctc
accaacgcctacggcgtcggccagtcgtcgctgccgcagaacatccagcagatcgccgac
ggcaccgaggtggcgggctacgtggtcgacttcaacatgttcatgtggctgcaggtcgac
gagggcctgcgcgccatgcagggcatggaggtcccgtacctcgacggtgactgggagtcg
gcggcacgggcggtctcgcacatcgtgaccatccgcaacgccgaccagtacctcaccccg
gccggctacgtcgccctcccgggcttcgaagaccagttcacgacgctctggggcaagtga
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